|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:467568..468321+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000309-T1 ID=KYF_000309-T1|Name=KYF_000309-T1|organism=Aspergillus niger KYF3|type=mRNA|length=754bp|location=Sequence derived from alignment at ch1:467568..468321+ (Aspergillus niger KYF3)
ATGGCATTCAAAGAAGACACCGAAACAGCCATCACCTCCACCTCCCTCGA
GGCCGGTGTGCTCGACGACAAGCCACCAAACGAGAACATAATCGACTGGG
ACGGCCCCCAGGACCCAGAAAACCCTCACAACTGGCCCGGACGCAAGCGA
TGGGCACACGTCATTGTAGTGGCCCTCATATCCCTAGTCATGTACCTGCA
ATCCTTCCCTAACAAAACCACCCTACTATTAACCCTACTCACCAGGAACA
TGGCTCCAACCATGTGCGCCCCGGGTATCAACGAAATCCTCAGTACCTTC
AACATCCAATCATCCACCATATCCACACTTGCAGTCACCCTGTACGTCCT
CGGCTTAGCAATGGGCCCCATGTTCATGTCCTCCCTCAGTGAAGTCTTCG
GCCGGCTTCCAGTATACCACCTCGCCAATCTCTTCTTCGTAGCCTTCGTC
ATCGGAAACGCCCTAAGCCAAAACATAGCTACCTTCATGATTTGTCGATT
CATCTCAGGCTGCGCGGGAGGAACTCCCATGGCTTTGGGAGGGGGCACCA
TTGCAGATGTGACCACCATCCAGCAACGCGCTGTCGCCATGTCTTTGTAT
AGTTTGGGTCCGATGGCTGGTCCGGTACGTCCCACTCTTTATCTAATTCT
TATACCCCTCAAAAAGACATACTATAATACAGGGACTCATCACCTCCTCT
CCCAATGATGGGTCCTCGGCCCCCTCATCGGCGGCTTCGTCGCATCCAAT
CTAA back to topCoding sequence (CDS) from alignment at ch1:467568..468321+ >KYF_000309-T1 ID=KYF_000309-T1|Name=KYF_000309-T1|organism=Aspergillus niger KYF3|type=CDS|length=1392bp|location=Sequence derived from alignment at ch1:467568..468321+ (Aspergillus niger KYF3)
ATGGCATTCAAAGAAGACACCGAAACAGCCATCACCTCCACCTCCCTCGA
GGCCGGTGTGCTCGACGACAAGCCACCAAACGAGAACATAATCGACTGGG
ACGGCCCCCAGGACCCAGAAAACCCTCACAACTGGCCCGGACGCAAGCGA
TGGGCACACGTCATTGTAGTGGCCCTCATATCCCTAGTCATGTACCTGCA
ATCCTTCCCTAACAAAACCACCCTACTATTAACCCTACTCACCAGGAACA
TGGCTCCAACCATGTGCGCCCCGGGTATCAACGAAATCCTCAGTACCTTC
AACATCCAATCATCCACCATATCCACACTTGCAGTCACCCTGTACGTCCT
CGGCTTAGCAATGGGCCCCATGTTCATGTCCTCCCTCAGTGAAGTCTTCG
GCCGGCTTCCAGTATACCACCTCGCCAATCTCTTCTTCGTAGCCTTCGTC
ATCGGAAACGCCCTAAGCCAAAACATAGCTACCTTCATGATTTGTCGATT
CATCTCAGGCTGCGCGGGAGGAACTCCCATGGCTTTGGGAGGGGGCACCA
TTGCAGATGTGACCACCATCCAGCAACGCGCTGTCGCCATGTCTTTGTAT
AGTTTGGGTCCGATGGCTGGTCCGGGACTCATCACCTCCTCTCCCAATGA
TGGGTCCTCGGCCCCCTCATCGGCGGCTTCGTCGCATCCAATCTAAATGG
CATTCAAAGAAGACACCGAAACAGCCATCACCTCCACCTCCCTCGAGGCC
GGTGTGCTCGACGACAAGCCACCAAACGAGAACATAATCGACTGGGACGG
CCCCCAGGACCCAGAAAACCCTCACAACTGGCCCGGACGCAAGCGATGGG
CACACGTCATTGTAGTGGCCCTCATATCCCTAGTCATGTACCTGCAATCC
TTCCCTAACAAAACCACCCTACTATTAACCCTACTCACCAGGAACATGGC
TCCAACCATGTGCGCCCCGGGTATCAACGAAATCCTCAGTACCTTCAACA
TCCAATCATCCACCATATCCACACTTGCAGTCACCCTGTACGTCCTCGGC
TTAGCAATGGGCCCCATGTTCATGTCCTCCCTCAGTGAAGTCTTCGGCCG
GCTTCCAGTATACCACCTCGCCAATCTCTTCTTCGTAGCCTTCGTCATCG
GAAACGCCCTAAGCCAAAACATAGCTACCTTCATGATTTGTCGATTCATC
TCAGGCTGCGCGGGAGGAACTCCCATGGCTTTGGGAGGGGGCACCATTGC
AGATGTGACCACCATCCAGCAACGCGCTGTCGCCATGTCTTTGTATAGTT
TGGGTCCGATGGCTGGTCCGGGACTCATCACCTCCTCTCCCAATGATGGG
TCCTCGGCCCCCTCATCGGCGGCTTCGTCGCATCCAATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:467568..468321 + |
|
