You are here

Home

KYF_000398-T1, KYF_000398-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000398-T1
Unique NameKYF_000398-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:736877..739087+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000398-T1 ID=KYF_000398-T1|Name=KYF_000398-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2211bp|location=Sequence derived from alignment at ch1:736877..739087+ (Aspergillus niger KYF3)
ATGTACTTCTCTTCCTTCTTGGCCCTAGGGGCCTTGGTTCAGGCTGCAGC
AGCAACCTATTTTGCCCCCAACTCTACCGGTCTTCGTATCCAGCATGGTT
TTGAGACGATTCTTATCCAGCCATTTGGGTACGACGGATTCCGTGTGCGC
GCATGGCCCTTCCGTCCGCCTTCGGGTAACGAGATCAGCTTCATCTACGA
TCCCCCGATCGAAGGCTATGAGGACACTGCGCATGGCATGAGCTATGACA
CCGCAACCACCGGCACGGAGCCTCGCACCTTGCGCAACGGCAATATCATC
CTGCGCACCACCGGCTGGGGTGGTACCACAGCCGGATACCGACTGTCCTT
TTATCGCGTCAATGACGATGGAAGTGAGACCCTTCTCACAAACGAATATG
CTCCGCTGAAGTCTCTCAACCCCCGGTACTATTACTGGCCGGGACCTGGG
GCCGAATTCTCAGCTGAGTTCTCTTTCAGTGCGACTCCGGATGAGCAGAT
CTATGGTACGGGCACGCAACAGGATCATATGATCAACAAGAAGGGCTCCG
TAATTGACATGGTCAACTTCAACTCCTACATCCCTACCCCGGTCTTCATG
AGCAATAAAGGCTATGCCTTCATCTGGAACATGCCAGCTGAGGGGCGTAT
GGAATTTGGCACCCTCCGGACCAGATTCACCGCCGCGTCCACGACGCTTG
TTGACTATGTAATCGTCGCCGCGCAGCCGGGCGACTACGACACCTTGCAG
CAGCGGATTTCGGCCCTCACAGGACGGGCCCCGGCCCCGCCTGACTTCTC
GCTTGGATACATCCAGTCCAAGCTACGATATGAAAACCAAACGGAGGTGG
AGCTGCTGGCTCAAAACTTCCATGACCGAAACATCCCGGTGTCCATGATC
GTTATTGACTACCAGTCCTGGGCTCACCAGGGTGATTGGGCGCTCGATCC
TCGCCTGTGGCCCAATGTTGCGCAGATGTCGGCGCGGGTCAAGAACCTCA
CCGGCGCCGAAATGATGGCATCGCTATGGCCCAGTGTTGCCGACGACAGC
GTCAATTACGCAGCCCTGCAGGCGAACGGCCTTCTCTCGGCCACGCGCGA
TGGACCTGGTACCACTGACTCCTGGAACGGATCATACATCCGGAACTATG
ACTCCACCAACCCCTCGGCGCGGAAGTTCCTCTGGAGCATGCTGAAGAAG
AACTACTACGACAAGGGTATCAAAAACTTTTGGATTGACCAAGCCGATGG
CGGAGCGCTGGGTGAGGCGTATGAGAACAACGGACAGAGCACGTATATTG
AGTCCATCCCGTTCACCCTGCCAAACGTGAACTATGCCGCTGGTACGCAG
CTCAGCGTGGGTAAGCTGTACCCCTGGGCGCATCAGCAGGCAATTGAGGA
GGGGTTCCGCAATGCAACAGATACCAAGGAAGGGAGCGCATGCGATCATG
TCTCCCTGAGTCGGTCTGGATACATCGGATCCCAGCGGTTCTGCAGCATG
ATCTGGTCGGGAGACACTACATCCGTTTGGGACACCCTGGCAGTGCAAGT
AGCCAGTGGACTGTCCGCCGCAGCAACAGGCTGGGGTTGGTGGACGGTCG
ATGCCGGTGGCTTCGAAGTCGACTCGACTGTTTGGTGGAGTGGAAACATT
GACACGCCTGAATACCGGGAGTTGTATGTGCGCTGGCTGGCTTGGACGAC
TTTCCTGCCATTCATGCGCACTCACGGTAGCCGGACCTGCTATTTCCAGG
ACGCCTACACCTGTGCCAATGAGCCGTGGTCCTATGGTGCAAGCAACACA
CCCATCATTGTCTCGTACATTCATCTGCGCTACCAGCTGGGTGCTTACCT
GAAGTCCATCTTCAACCAGTTCCACCTCACAGGCCGGAGCATCATGCGCC
CATTGTATATGGATTTCGAGAAGACAGACCCGAAGATCTCCCAGCTGGTG
TCGTCGAACAGCAACTACACGACGCAACAGTACATGTTTGGCCCACGTCT
CCTGGTCTCGCCAGTGACCTTGCCGAACGTGACTGAGTGGCCCGTGTATC
TGCCGCAGACGGGACAGAACAACACCAAGCCTTGGACATACTGGTGGACG
AATGAAACGTATGCCGGAGGACAGGTCGTCAAGGTGCCTGCCCCCTTGCA
ACATATCCCCGTGTTTCATCTGGGATCGCGCGAAGAGCTTCTCTCGGGTA
ATGTTTTCTAG
back to top

Coding sequence (CDS) from alignment at ch1:736877..739087+

>KYF_000398-T1 ID=KYF_000398-T1|Name=KYF_000398-T1|organism=Aspergillus niger KYF3|type=CDS|length=2211bp|location=Sequence derived from alignment at ch1:736877..739087+ (Aspergillus niger KYF3)
ATGTACTTCTCTTCCTTCTTGGCCCTAGGGGCCTTGGTTCAGGCTGCAGC
AGCAACCTATTTTGCCCCCAACTCTACCGGTCTTCGTATCCAGCATGGTT
TTGAGACGATTCTTATCCAGCCATTTGGGTACGACGGATTCCGTGTGCGC
GCATGGCCCTTCCGTCCGCCTTCGGGTAACGAGATCAGCTTCATCTACGA
TCCCCCGATCGAAGGCTATGAGGACACTGCGCATGGCATGAGCTATGACA
CCGCAACCACCGGCACGGAGCCTCGCACCTTGCGCAACGGCAATATCATC
CTGCGCACCACCGGCTGGGGTGGTACCACAGCCGGATACCGACTGTCCTT
TTATCGCGTCAATGACGATGGAAGTGAGACCCTTCTCACAAACGAATATG
CTCCGCTGAAGTCTCTCAACCCCCGGTACTATTACTGGCCGGGACCTGGG
GCCGAATTCTCAGCTGAGTTCTCTTTCAGTGCGACTCCGGATGAGCAGAT
CTATGGTACGGGCACGCAACAGGATCATATGATCAACAAGAAGGGCTCCG
TAATTGACATGGTCAACTTCAACTCCTACATCCCTACCCCGGTCTTCATG
AGCAATAAAGGCTATGCCTTCATCTGGAACATGCCAGCTGAGGGGCGTAT
GGAATTTGGCACCCTCCGGACCAGATTCACCGCCGCGTCCACGACGCTTG
TTGACTATGTAATCGTCGCCGCGCAGCCGGGCGACTACGACACCTTGCAG
CAGCGGATTTCGGCCCTCACAGGACGGGCCCCGGCCCCGCCTGACTTCTC
GCTTGGATACATCCAGTCCAAGCTACGATATGAAAACCAAACGGAGGTGG
AGCTGCTGGCTCAAAACTTCCATGACCGAAACATCCCGGTGTCCATGATC
GTTATTGACTACCAGTCCTGGGCTCACCAGGGTGATTGGGCGCTCGATCC
TCGCCTGTGGCCCAATGTTGCGCAGATGTCGGCGCGGGTCAAGAACCTCA
CCGGCGCCGAAATGATGGCATCGCTATGGCCCAGTGTTGCCGACGACAGC
GTCAATTACGCAGCCCTGCAGGCGAACGGCCTTCTCTCGGCCACGCGCGA
TGGACCTGGTACCACTGACTCCTGGAACGGATCATACATCCGGAACTATG
ACTCCACCAACCCCTCGGCGCGGAAGTTCCTCTGGAGCATGCTGAAGAAG
AACTACTACGACAAGGGTATCAAAAACTTTTGGATTGACCAAGCCGATGG
CGGAGCGCTGGGTGAGGCGTATGAGAACAACGGACAGAGCACGTATATTG
AGTCCATCCCGTTCACCCTGCCAAACGTGAACTATGCCGCTGGTACGCAG
CTCAGCGTGGGTAAGCTGTACCCCTGGGCGCATCAGCAGGCAATTGAGGA
GGGGTTCCGCAATGCAACAGATACCAAGGAAGGGAGCGCATGCGATCATG
TCTCCCTGAGTCGGTCTGGATACATCGGATCCCAGCGGTTCTGCAGCATG
ATCTGGTCGGGAGACACTACATCCGTTTGGGACACCCTGGCAGTGCAAGT
AGCCAGTGGACTGTCCGCCGCAGCAACAGGCTGGGGTTGGTGGACGGTCG
ATGCCGGTGGCTTCGAAGTCGACTCGACTGTTTGGTGGAGTGGAAACATT
GACACGCCTGAATACCGGGAGTTGTATGTGCGCTGGCTGGCTTGGACGAC
TTTCCTGCCATTCATGCGCACTCACGGTAGCCGGACCTGCTATTTCCAGG
ACGCCTACACCTGTGCCAATGAGCCGTGGTCCTATGGTGCAAGCAACACA
CCCATCATTGTCTCGTACATTCATCTGCGCTACCAGCTGGGTGCTTACCT
GAAGTCCATCTTCAACCAGTTCCACCTCACAGGCCGGAGCATCATGCGCC
CATTGTATATGGATTTCGAGAAGACAGACCCGAAGATCTCCCAGCTGGTG
TCGTCGAACAGCAACTACACGACGCAACAGTACATGTTTGGCCCACGTCT
CCTGGTCTCGCCAGTGACCTTGCCGAACGTGACTGAGTGGCCCGTGTATC
TGCCGCAGACGGGACAGAACAACACCAAGCCTTGGACATACTGGTGGACG
AATGAAACGTATGCCGGAGGACAGGTCGTCAAGGTGCCTGCCCCCTTGCA
ACATATCCCCGTGTTTCATCTGGGATCGCGCGAAGAGCTTCTCTCGGGTA
ATGTTTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000398KYF_000398Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000398-T1.exon1KYF_000398-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000398-T1.cdsKYF_000398-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000398-T1KYF_000398-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH31
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR000322
DBxrefInterPro:IPR013780
DBxrefPFAM:PF01055
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:736877..739087 +
Powered by Drupal