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KYF_000571-T1, KYF_000571-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000571-T1
Unique NameKYF_000571-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1265131..1267649+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000571-T1 ID=KYF_000571-T1|Name=KYF_000571-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2519bp|location=Sequence derived from alignment at ch1:1265131..1267649+ (Aspergillus niger KYF3)
ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC
GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG
ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTAGCGTAGAAGTG
GAGTCTCGTTCATATGGGGTCTGCTTGCTGACATCTTCTGCTTGCAAGGT
GTCTTGGAGAAATTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGC
CGTACAGAGACAGGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTAT
CGTTGAAACCCGATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAG
GGAACTATTACCTTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGA
CTTCCTGACTACTATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACG
AATACCGATTGACAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTG
CTGCCCCAGGATATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCT
TCCGGATACCATCAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAA
AGATCAAGGTCGTGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGAT
CCGGCGATGTTGCAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCG
ATTGAAAGGCACGGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCG
GCCTGGTCATTCCGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCG
GAGCAGAAGCCGGCGGAAGACGGTGCAGGCGAGGCTCGTAAAGAGGACGA
TATTCTGCTGGCTATTCGCGACGACGATGACGACGAGGAGGAAGTTCAAG
TGCACAGTTTCGAAATTCCCAACGAAGCAGTCGAACCCGTCAAGGCGCGC
TGTCAGGCTATGGGCTGTCCAGCATTGGAGGAGTATGATTTCCGAAATGA
TGAGATCAATCCCACCTTGGATATCGACTTGAAGCCGGCAGCACGAATTC
GAAGCTACCAAGAAAAGAGTTTGAGTAAGATGTTCGGTAACGGACGTGCG
AAGAGTGGAATTATCGTCTTGCCTTGTGGTGCCGGAAAAACGTTGGTGGG
TATTACGGCGGGCTGCACGATCAAGAAGGGGACAATTGTCTTGTGTACCA
GTTCAATGTCTGTGGTGCAATGGCGTAACGAGTTCTTGCGCTGGTCCAAT
ATTGATCCCGGTGATATTGCGGTTTTCACCTCAGATAACAAGGAGAAATT
CCGTCGATCGACTGGTATCATCGTGTCAACCTACTCCATGGTGTCCCAGA
CGCGTGCTCGGTCGCATGATGCGCAGAAGATGATGGATTGGATTCAGTCA
CGAGAGTGGGGTCTGATGATTCTTGACGAGGTGCACGTCGTGCCTGCATC
GATGTTCCGAAAGGTCACATCGGCAATCGCATGTCAGAGTAAATTGGGAT
TGACGGCAACGCTGCTGCGAGAGGATGACAAGATCAAGGATCTGAACTTC
CTGATTGGTCCCAAGTTGTACGAAGCCAACTGGATGGAACTGGCCGAGCA
AGGGCACATTGCCAAGGTTCAGTGCGCCGAGGTATGGTGTCCGATGACGA
CCGAATTCTACTCGGAGTACATGAGAGAAAAGTCACGAAAGGCTGCTCTT
CTATACATTATGAACCCTCGGAAATTCCAAGCATGCCAGTTCCTGATCGA
CTACCACGAGAAGCGAGGTGACAAGGTCATTGTCTTTTCCGACAACGTTT
ACGCTCTTCAGCGGTATGCACTCAAGCTGAACAAGGCCTATATCTACGGC
GGTACTCCACAGAACGAGCGCATGCGCATTTTGGAGAATTTCCAGCACAA
TGAACAAGTCAATACCATCTTCCTCTCCAAGATCGGAGACACGTCGCTCG
ATCTGCCGGAAGCCACCTGTCTGATCCAGATCTCGTCGCATTACGGTTCC
CGTCGTCAGGAAGCCCAACGACTTGGTCGGATTCTGCGAGCCAAGCGTCG
AAACGACGAGGGATTCAACGCCTTCTTCTACTCGCTTGTGTCGAAAGACA
CAGATGAAATGTTCTACTCTTCCAAGCGACAGGCTTTCCTTGTCGACCAG
GGCTACGCGTTCAAGGTCATTACTCACCTGCAAGGCATCGAGAACCTGGA
AGGGTTGGCGTACGCCACGCCCAGCGAACGCCGTGAGCTGCTGCAGGAGG
TGATGTTACAGAACGAGACTTCTGCCGAGGTAGAGCACGTCACGGACGAT
CTCTTCTCAGGACGTTCGGGCGGCCAGCGAAAGGGAGCAGTCAAGCGCAG
TGCCGCGACACTCAGCGGCCTGGCCGGCGGTGAAGACATGGCGTATATCG
AGTACAACAAGAGCCGGAACAAGCAGCTGAAGGACAAGGTGGGCCATCAC
CCGCTGTTCCGGAAGCTGGAGCGGGAACGACTCAAGCGGAAGAAGGAGTT
GGAGGATTTCATGCGGTAG
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Coding sequence (CDS) from alignment at ch1:1265131..1267649+

>KYF_000571-T1 ID=KYF_000571-T1|Name=KYF_000571-T1|organism=Aspergillus niger KYF3|type=CDS|length=4914bp|location=Sequence derived from alignment at ch1:1265131..1267649+ (Aspergillus niger KYF3)
ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC
GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG
ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTGTCTTGGAGAAA
TTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGCCGTACAGAGACA
GGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTATCGTTGAAACCCG
ATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAGGGAACTATTACC
TTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGACTTCCTGACTAC
TATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACGAATACCGATTGA
CAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTGCTGCCCCAGGAT
ATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCTTCCGGATACCAT
CAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAAAGATCAAGGTCG
TGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGATCCGGCGATGTTG
CAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCGATTGAAAGGCAC
GGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCGGCCTGGTCATTC
CGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCGGAGCAGAAGCCG
GCGGAAGACGGTGCAGGCGAGGCTCGTAAAGAGGACGATATTCTGCTGGC
TATTCGCGACGACGATGACGACGAGGAGGAAGTTCAAGTGCACAGTTTCG
AAATTCCCAACGAAGCAGTCGAACCCGTCAAGGCGCGCTGTCAGGCTATG
GGCTGTCCAGCATTGGAGGAGTATGATTTCCGAAATGATGAGATCAATCC
CACCTTGGATATCGACTTGAAGCCGGCAGCACGAATTCGAAGCTACCAAG
AAAAGAGTTTGAGTAAGATGTTCGGTAACGGACGTGCGAAGAGTGGAATT
ATCGTCTTGCCTTGTGGTGCCGGAAAAACGTTGGTGGGTATTACGGCGGG
CTGCACGATCAAGAAGGGGACAATTGTCTTGTGTACCAGTTCAATGTCTG
TGGTGCAATGGCGTAACGAGTTCTTGCGCTGGTCCAATATTGATCCCGGT
GATATTGCGGTTTTCACCTCAGATAACAAGGAGAAATTCCGTCGATCGAC
TGGTATCATCGTGTCAACCTACTCCATGGTGTCCCAGACGCGTGCTCGGT
CGCATGATGCGCAGAAGATGATGGATTGGATTCAGTCACGAGAGTGGGGT
CTGATGATTCTTGACGAGGTGCACGTCGTGCCTGCATCGATGTTCCGAAA
GGTCACATCGGCAATCGCATGTCAGAGTAAATTGGGATTGACGGCAACGC
TGCTGCGAGAGGATGACAAGATCAAGGATCTGAACTTCCTGATTGGTCCC
AAGTTGTACGAAGCCAACTGGATGGAACTGGCCGAGCAAGGGCACATTGC
CAAGGTTCAGTGCGCCGAGGTATGGTGTCCGATGACGACCGAATTCTACT
CGGAGTACATGAGAGAAAAGTCACGAAAGGCTGCTCTTCTATACATTATG
AACCCTCGGAAATTCCAAGCATGCCAGTTCCTGATCGACTACCACGAGAA
GCGAGGTGACAAGGTCATTGTCTTTTCCGACAACGTTTACGCTCTTCAGC
GGTATGCACTCAAGCTGAACAAGGCCTATATCTACGGCGGTACTCCACAG
AACGAGCGCATGCGCATTTTGGAGAATTTCCAGCACAATGAACAAGTCAA
TACCATCTTCCTCTCCAAGATCGGAGACACGTCGCTCGATCTGCCGGAAG
CCACCTGTCTGATCCAGATCTCGTCGCATTACGGTTCCCGTCGTCAGGAA
GCCCAACGACTTGGTCGGATTCTGCGAGCCAAGCGTCGAAACGACGAGGG
ATTCAACGCCTTCTTCTACTCGCTTGTGTCGAAAGACACAGATGAAATGT
TCTACTCTTCCAAGCGACAGGCTTTCCTTGTCGACCAGGGCTACGCGTTC
AAGGTCATTACTCACCTGCAAGGCATCGAGAACCTGGAAGGGTTGGCGTA
CGCCACGCCCAGCGAACGCCGTGAGCTGCTGCAGGAGGTGATGTTACAGA
ACGAGACTTCTGCCGAGGTAGAGCACGTCACGGACGATCTCTTCTCAGGA
CGTTCGGGCGGCCAGCGAAAGGGAGCAGTCAAGCGCAGTGCCGCGACACT
CAGCGGCCTGGCCGGCGGTGAAGACATGGCGTATATCGAGTACAACAAGA
GCCGGAACAAGCAGCTGAAGGACAAGGTGGGCCATCACCCGCTGTTCCGG
AAGCTGGAGCGGGAACGACTCAAGCGGAAGAAGGAGTTGGAGGATTTCAT
GCGGTAGATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTA
GAGCGTCGAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAA
TACTCAGACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTGTCTT
GGAGAAATTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGCCGTAC
AGAGACAGGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTATCGTTG
AAACCCGATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAGGGAAC
TATTACCTTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGACTTCC
TGACTACTATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACGAATAC
CGATTGACAGGGAACAGTTTGTATGCGGCTGTCTCGGTGGGTTTGCTGCC
CCAGGATATCATCAACTTTCTAGATCGATTGTCGAAAACGCCGCTTCCGG
ATACCATCAAGTCGTTCATTCTCGACTTCACGAAATCATACGGAAAGATC
AAGGTCGTGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGATCCGGC
GATGTTGCAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGCGATTGA
AAGGCACGGAGGGCATTATTCAGCAGGCAGCCCCGAAAATGGGCGGCCTG
GTCATTCCGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCGGAGCA
GAAGCCGGCGGAAGACGGTGCAGGCGAGGCTCGTAAAGAGGACGATATTC
TGCTGGCTATTCGCGACGACGATGACGACGAGGAGGAAGTTCAAGTGCAC
AGTTTCGAAATTCCCAACGAAGCAGTCGAACCCGTCAAGGCGCGCTGTCA
GGCTATGGGCTGTCCAGCATTGGAGGAGTATGATTTCCGAAATGATGAGA
TCAATCCCACCTTGGATATCGACTTGAAGCCGGCAGCACGAATTCGAAGC
TACCAAGAAAAGAGTTTGAGTAAGATGTTCGGTAACGGACGTGCGAAGAG
TGGAATTATCGTCTTGCCTTGTGGTGCCGGAAAAACGTTGGTGGGTATTA
CGGCGGGCTGCACGATCAAGAAGGGGACAATTGTCTTGTGTACCAGTTCA
ATGTCTGTGGTGCAATGGCGTAACGAGTTCTTGCGCTGGTCCAATATTGA
TCCCGGTGATATTGCGGTTTTCACCTCAGATAACAAGGAGAAATTCCGTC
GATCGACTGGTATCATCGTGTCAACCTACTCCATGGTGTCCCAGACGCGT
GCTCGGTCGCATGATGCGCAGAAGATGATGGATTGGATTCAGTCACGAGA
GTGGGGTCTGATGATTCTTGACGAGGTGCACGTCGTGCCTGCATCGATGT
TCCGAAAGGTCACATCGGCAATCGCATGTCAGAGTAAATTGGGATTGACG
GCAACGCTGCTGCGAGAGGATGACAAGATCAAGGATCTGAACTTCCTGAT
TGGTCCCAAGTTGTACGAAGCCAACTGGATGGAACTGGCCGAGCAAGGGC
ACATTGCCAAGGTTCAGTGCGCCGAGGTATGGTGTCCGATGACGACCGAA
TTCTACTCGGAGTACATGAGAGAAAAGTCACGAAAGGCTGCTCTTCTATA
CATTATGAACCCTCGGAAATTCCAAGCATGCCAGTTCCTGATCGACTACC
ACGAGAAGCGAGGTGACAAGGTCATTGTCTTTTCCGACAACGTTTACGCT
CTTCAGCGGTATGCACTCAAGCTGAACAAGGCCTATATCTACGGCGGTAC
TCCACAGAACGAGCGCATGCGCATTTTGGAGAATTTCCAGCACAATGAAC
AAGTCAATACCATCTTCCTCTCCAAGATCGGAGACACGTCGCTCGATCTG
CCGGAAGCCACCTGTCTGATCCAGATCTCGTCGCATTACGGTTCCCGTCG
TCAGGAAGCCCAACGACTTGGTCGGATTCTGCGAGCCAAGCGTCGAAACG
ACGAGGGATTCAACGCCTTCTTCTACTCGCTTGTGTCGAAAGACACAGAT
GAAATGTTCTACTCTTCCAAGCGACAGGCTTTCCTTGTCGACCAGGGCTA
CGCGTTCAAGGTCATTACTCACCTGCAAGGCATCGAGAACCTGGAAGGGT
TGGCGTACGCCACGCCCAGCGAACGCCGTGAGCTGCTGCAGGAGGTGATG
TTACAGAACGAGACTTCTGCCGAGGTAGAGCACGTCACGGACGATCTCTT
CTCAGGACGTTCGGGCGGCCAGCGAAAGGGAGCAGTCAAGCGCAGTGCCG
CGACACTCAGCGGCCTGGCCGGCGGTGAAGACATGGCGTATATCGAGTAC
AACAAGAGCCGGAACAAGCAGCTGAAGGACAAGGTGGGCCATCACCCGCT
GTTCCGGAAGCTGGAGCGGGAACGACTCAAGCGGAAGAAGGAGTTGGAGG
ATTTCATGCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO:0005524ATP binding
GO:0003677DNA binding
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSL2KYF_000571Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000571-T1.exon1KYF_000571-T1.exon1Aspergillus niger KYF3exon
KYF_000571-T1.exon2KYF_000571-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000571-T1.cdsKYF_000571-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000571-T1KYF_000571-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260HSP
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001161
DBxrefInterPro:IPR032438
DBxrefInterPro:IPR032830
DBxrefInterPro:IPR006935
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF13625
DBxrefPFAM:PF00271
DBxrefPFAM:PF16203
ProductDNA repair helicase RAD25
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1265131..1267649 +
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