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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1354239..1355446- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000603-T1 ID=KYF_000603-T1|Name=KYF_000603-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1208bp|location=Sequence derived from alignment at ch1:1354239..1355446- (Aspergillus niger KYF3)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTGAGTATTACTCTTCA
TTTACCTGAGCTCCAGCTCCAAACATCATTGCGACAACCCCTCCTCTCTT
ATCGATAACACCGCGCAACTGCGCACAGGATGGAAGGATGGCCACACCTA
CACATACAATGCGCGCACATCCTATCTACCTCTATCCATCTATACACCTT
CCAATACATTGTCCAGAGAGAAGCTAACAAGCTATCTCCCAGGTCCTCTC
GGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACC
GGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCA
AGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCA
CCACACCCAATGCCTCCTCCACCTCACAACCAGATAATACAACAACAACG
GCAACAGAAACAGAAGGTGGACGCGCAATAAAACACGGCTCTCTCCGCTG
CATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGC
GCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTG
TGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGA
TGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACAATCGATG
CTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACT
ACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTG
CGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTT
ATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGG
GGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCC
CGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGG
AGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAA
GAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTC
GTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGG
GGCAATGA back to topCoding sequence (CDS) from alignment at ch1:1354239..1355446- >KYF_000603-T1 ID=KYF_000603-T1|Name=KYF_000603-T1|organism=Aspergillus niger KYF3|type=CDS|length=1998bp|location=Sequence derived from alignment at ch1:1354239..1355446- (Aspergillus niger KYF3)
GTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACT
CGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCG
ATCTCACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAA
ATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCAC
CATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATAATACAA
CAACAACGGCAACAGAAACAGAAGGTGGACGCGCAATAAAACACGGCTCT
CTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGT
AATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCG
ATGTGCTGTGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGA
ACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTAC
AATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTAC
TGGTCACTACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTG
AATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATAT
GTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGA
GTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGA
AAGGTGCCCGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGG
TGGGGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGA
AGGAGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAA
TGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGA
GATTGAGGGGCAATGAATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGG
TCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTC
GCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGA
TCTCACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAA
TTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACC
ATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATAATACAAC
AACAACGGCAACAGAAACAGAAGGTGGACGCGCAATAAAACACGGCTCTC
TCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTA
ATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGA
TGTGCTGTGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAA
CTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACA
ATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACT
GGTCACTACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGA
ATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATG
TCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAG
TGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAA
AGGTGCCCGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGT
GGGGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAA
GGAGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAAT
GTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGAG
ATTGAGGGGCAATGAATGCCTCTCGACGGGGTGAAGAATGTTGTGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016226 | iron-sulfur cluster assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR028600 |
| DBxref | InterPro:IPR019591 |
| DBxref | InterPro:IPR033756 |
| DBxref | PFAM:PF01656 |
| Product | cytosolic Fe-S cluster assembly factor cfd1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1354239..1355446 - |
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