You are here

Home

KYF_000643-T1, KYF_000643-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000643-T1
Unique NameKYF_000643-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1451144..1452362+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000643-T1 ID=KYF_000643-T1|Name=KYF_000643-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1219bp|location=Sequence derived from alignment at ch1:1451144..1452362+ (Aspergillus niger KYF3)
ATGCCCGCTCCTCTTGATGGAATTCGTGTGGTCGAGCTGGCTGGCCTAGC
CCCCGGTTCGTCCGTCTATCACCCCCTTTCCCCAAAAAGAGATCCCCCAA
AGAGAGCCCCCCATACTGACATACATCTACATAGGTCCCTTCACCGGACT
ATTACTTGCCGACTATGGAGCCTCCGTACTGCGAATAGACCGACCAAAAG
CCAAGAGCGCCGACCAGTTGACGCGCAGGAAAACGTCCGCTACCATTGAC
CTCCGAGACCCCGCCTCTCATCGCGTGCTCCTCTCCGCTCTCAAGGACGC
CGATGTCCTGATTGATCCATATCGCCCCGGCGTCCTGGAGCGACTGGGCT
TGTCGCCGTCGGAGGTGCTTCTGAAACATAACCCTCGCTTGATCGTGGCT
CGTTTGACGGGCTTTCGTCGTGATGGCAAATACAAGGATATGGCGGGTCA
CGACATCAACTATATTGCTGTGGCGGGGGTACTATCTATGATAGGTCGGT
CGGGAGAACGCCCTTACCCACCACTCAATCTTCTCGGAGACTTTGCTGGC
GGAGGTGCCACATGCTTCTTGGGGATCCTGTTAGCGTTGATCTCGCGCAC
GCACACTGGACGCGGCCAGGTCGTCGAGGCAAACATGGTCGACGGCTCTG
CGTATTTGGCTGCAATGCCACGGTTGGGCAGACAAACGCCCTTCTGGGAC
GCGCCCCGCGGTCAGAATACGCTGGACGGAGGAAGTCCGTTTTACGACAC
ATACGAAACCAAGGATAAGGGAAAGTATTTCGCGGTGGGCGCGTTGGAGC
CGCAGTTCTACGATGCCCTGCTGAAGGGGCTCGAATTGAACCCCGAAGAA
CTGCCACCGCGGGACAACAAGGACAACTGGCCGGCGCTCCGGGCTGCCTT
CGCCAAGCGGTTCAAAGAAAAGACCCGGGCTGAGTGGGAGGCCGTATTCG
ATGGTACAGATGCCTGCGCCACACCTGTGTTGGAACAAGATGAGCTCGAG
AAGAGTGGCTATGAGCAACGGCCCGCTGTCCATCTGGTGGAAACTCCCGG
GCTCCCGATTCCGGCCGACGACGGGGGCTGGACGGGGGGTGGCCTGATAC
CCGGCACCGGGGGCGAAGAGACGCTCAAAACATGGCTGGGGTGGAAGAAG
GGCCGCGATTATGATGTCAGGCGCGATGGAGCACTAGTAAAGCTACCGGA
TGGTAAAGCTAAGCTCTGA
back to top

Coding sequence (CDS) from alignment at ch1:1451144..1452362+

>KYF_000643-T1 ID=KYF_000643-T1|Name=KYF_000643-T1|organism=Aspergillus niger KYF3|type=CDS|length=2280bp|location=Sequence derived from alignment at ch1:1451144..1452362+ (Aspergillus niger KYF3)
ATGCCCGCTCCTCTTGATGGAATTCGTGTGGTCGAGCTGGCTGGCCTAGC
CCCCGGTCCCTTCACCGGACTATTACTTGCCGACTATGGAGCCTCCGTAC
TGCGAATAGACCGACCAAAAGCCAAGAGCGCCGACCAGTTGACGCGCAGG
AAAACGTCCGCTACCATTGACCTCCGAGACCCCGCCTCTCATCGCGTGCT
CCTCTCCGCTCTCAAGGACGCCGATGTCCTGATTGATCCATATCGCCCCG
GCGTCCTGGAGCGACTGGGCTTGTCGCCGTCGGAGGTGCTTCTGAAACAT
AACCCTCGCTTGATCGTGGCTCGTTTGACGGGCTTTCGTCGTGATGGCAA
ATACAAGGATATGGCGGGTCACGACATCAACTATATTGCTGTGGCGGGGG
TACTATCTATGATAGGTCGGTCGGGAGAACGCCCTTACCCACCACTCAAT
CTTCTCGGAGACTTTGCTGGCGGAGGTGCCACATGCTTCTTGGGGATCCT
GTTAGCGTTGATCTCGCGCACGCACACTGGACGCGGCCAGGTCGTCGAGG
CAAACATGGTCGACGGCTCTGCGTATTTGGCTGCAATGCCACGGTTGGGC
AGACAAACGCCCTTCTGGGACGCGCCCCGCGGTCAGAATACGCTGGACGG
AGGAAGTCCGTTTTACGACACATACGAAACCAAGGATAAGGGAAAGTATT
TCGCGGTGGGCGCGTTGGAGCCGCAGTTCTACGATGCCCTGCTGAAGGGG
CTCGAATTGAACCCCGAAGAACTGCCACCGCGGGACAACAAGGACAACTG
GCCGGCGCTCCGGGCTGCCTTCGCCAAGCGGTTCAAAGAAAAGACCCGGG
CTGAGTGGGAGGCCGTATTCGATGGTACAGATGCCTGCGCCACACCTGTG
TTGGAACAAGATGAGCTCGAGAAGAGTGGCTATGAGCAACGGCCCGCTGT
CCATCTGGTGGAAACTCCCGGGCTCCCGATTCCGGCCGACGACGGGGGCT
GGACGGGGGGTGGCCTGATACCCGGCACCGGGGGCGAAGAGACGCTCAAA
ACATGGCTGGGGTGGAAGAAGGGCCGCGATTATGATGTCAGGCGCGATGG
AGCACTAGTAAAGCTACCGGATGGTAAAGCTAAGCTCTGAATGCCCGCTC
CTCTTGATGGAATTCGTGTGGTCGAGCTGGCTGGCCTAGCCCCCGGTCCC
TTCACCGGACTATTACTTGCCGACTATGGAGCCTCCGTACTGCGAATAGA
CCGACCAAAAGCCAAGAGCGCCGACCAGTTGACGCGCAGGAAAACGTCCG
CTACCATTGACCTCCGAGACCCCGCCTCTCATCGCGTGCTCCTCTCCGCT
CTCAAGGACGCCGATGTCCTGATTGATCCATATCGCCCCGGCGTCCTGGA
GCGACTGGGCTTGTCGCCGTCGGAGGTGCTTCTGAAACATAACCCTCGCT
TGATCGTGGCTCGTTTGACGGGCTTTCGTCGTGATGGCAAATACAAGGAT
ATGGCGGGTCACGACATCAACTATATTGCTGTGGCGGGGGTACTATCTAT
GATAGGTCGGTCGGGAGAACGCCCTTACCCACCACTCAATCTTCTCGGAG
ACTTTGCTGGCGGAGGTGCCACATGCTTCTTGGGGATCCTGTTAGCGTTG
ATCTCGCGCACGCACACTGGACGCGGCCAGGTCGTCGAGGCAAACATGGT
CGACGGCTCTGCGTATTTGGCTGCAATGCCACGGTTGGGCAGACAAACGC
CCTTCTGGGACGCGCCCCGCGGTCAGAATACGCTGGACGGAGGAAGTCCG
TTTTACGACACATACGAAACCAAGGATAAGGGAAAGTATTTCGCGGTGGG
CGCGTTGGAGCCGCAGTTCTACGATGCCCTGCTGAAGGGGCTCGAATTGA
ACCCCGAAGAACTGCCACCGCGGGACAACAAGGACAACTGGCCGGCGCTC
CGGGCTGCCTTCGCCAAGCGGTTCAAAGAAAAGACCCGGGCTGAGTGGGA
GGCCGTATTCGATGGTACAGATGCCTGCGCCACACCTGTGTTGGAACAAG
ATGAGCTCGAGAAGAGTGGCTATGAGCAACGGCCCGCTGTCCATCTGGTG
GAAACTCCCGGGCTCCCGATTCCGGCCGACGACGGGGGCTGGACGGGGGG
TGGCCTGATACCCGGCACCGGGGGCGAAGAGACGCTCAAAACATGGCTGG
GGTGGAAGAAGGGCCGCGATTATGATGTCAGGCGCGATGGAGCACTAGTA
AAGCTACCGGATGGTAAAGCTAAGCTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008410CoA-transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CEFD2KYF_000643Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000643-T1.exon1KYF_000643-T1.exon1Aspergillus niger KYF3exon
KYF_000643-T1.exon2KYF_000643-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000643-T1.cdsKYF_000643-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000643-T1KYF_000643-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023606
DBxrefInterPro:IPR003673
DBxrefPFAM:PF02515
ProductIsopenicillin N epimerase component 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1451144..1452362 +
Powered by Drupal