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KYF_000673-T1, KYF_000673-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000673-T1
Unique NameKYF_000673-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1550948..1551823-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000673-T1 ID=KYF_000673-T1|Name=KYF_000673-T1|organism=Aspergillus niger KYF3|type=mRNA|length=876bp|location=Sequence derived from alignment at ch1:1550948..1551823- (Aspergillus niger KYF3)
ATGCTTTACTTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATGC
TAATGATTTGGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGAG
ACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACC
TATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTCGTACGTATCTG
GCCTCTCATTATTCATCACAGCTGCTAGCAGTGAACTGCGTCATAGATCC
ACATCTAACGTTCCAATACAGAAAATTCGTACCATCGAGCTGGATGGAAA
GACGGTGAAACTCCAGATCGTAAGGCAGCCCCGTTCACAACAGTCGCTCA
CCTGGCTTAACTAACGGGCGCTCTAGTGGGATACTGCAGGCCAGGAACGT
TTCCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGT
CGTCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGC
TTCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTC
GGAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGC
TAAGGTATGTGGCCAGACCTTGGTGTGGGACTCTTCATTTCTGGCAGAGT
GGGTGATTGACGCAATGTGTTGTTGGTTTAGGAATTCGCCGACAGCCTTG
GGATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAG
GCTTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGAC
TGTCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAAT
CCGGCTCCGCGGGCGGCTGCTGCTAG
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Coding sequence (CDS) from alignment at ch1:1550948..1551823-

>KYF_000673-T1 ID=KYF_000673-T1|Name=KYF_000673-T1|organism=Aspergillus niger KYF3|type=CDS|length=2640bp|location=Sequence derived from alignment at ch1:1550948..1551823- (Aspergillus niger KYF3)
GAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACCTCGGCGAAGAA
CGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAGGCAGATCAAGG
AACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTGTGCAGGTTGGC
CAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGCTGCTAGTGGGA
TACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCTTACTACCGTG
GTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACATGGACTCTTTC
AACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACGCCACTGAAGG
TGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAAGACAAAAAGG
TCGTGGAATACACAGTGGCTAAGAAAATTCGTACCATCGAGCTGGATGGA
AAGACGGTGAAACTCCAGATCATGCTTTACTTGGCCGGCGCGGCCCTCTG
TGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATACGATTATCTTT
TCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTCGTGCTTGCTC
CTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCTCCACCATCGG
AGTTGACTTCGAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACCT
CGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAGG
CAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTGT
GCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGCT
GCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCT
TACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACAT
GGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACG
CCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAA
GACAAAAAGGTCGTGGAATACACAGTGGCTAAGAAAATTCGTACCATCGA
GCTGGATGGAAAGACGGTGAAACTCCAGATCATGCTTTACTTGGCCGGCG
CGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATAC
GATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTC
GTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCT
CCACCATCGGAGTTGACTTCGAATTCGCCGACAGCCTTGGGATCCCGTTC
TTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGAC
AATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACA
AGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCG
GGCGGCTGCTGCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAAT
CACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATG
TTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATT
GATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAG
CGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCTAAGAAAATTC
GTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGATCATGCTTTAC
TTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTT
GGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTG
TCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAG
AGCTACATCTCCACCATCGGAGTTGACTTCGAATTCGCCGACAGCCTTGG
GATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGG
CTTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACT
GTCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATC
CGGCTCCGCGGGCGGCTGCTGCTAGTGGGATACTGCAGGCCAGGAACGTT
TCCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTC
GTCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCT
TCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCG
GAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCT
AAGAAAATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGAT
CATGCTTTACTTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATG
CTAATGATTTGGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGA
GACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATAC
CTATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT1KYF_000673Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000673-T1KYF_000673-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000673-T1.cdsKYF_000673-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000673-T1.exon4KYF_000673-T1.exon4Aspergillus niger KYF3exon
KYF_000673-T1.exon3KYF_000673-T1.exon3Aspergillus niger KYF3exon
KYF_000673-T1.exon2KYF_000673-T1.exon2Aspergillus niger KYF3exon
KYF_000673-T1.exon1KYF_000673-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductGTP-binding protein of the rab
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1550948..1551823 -
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