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KYF_000681-T1, KYF_000681-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000681-T1
Unique NameKYF_000681-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1585282..1586199-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000681-T1 ID=KYF_000681-T1|Name=KYF_000681-T1|organism=Aspergillus niger KYF3|type=mRNA|length=918bp|location=Sequence derived from alignment at ch1:1585282..1586199- (Aspergillus niger KYF3)
ATGAATATCTTCAGGTTATTAGGTGAGTTGTTTGTTCGCTCTCAGTTCAA
TTGACGCACCATGCTAATTCTTACAAACAAGCCGACTTTTCCCATCTTGC
GTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTGTATGCTGTC
ATTATAACGGATTCTTAGCATTTTTCTGACTGGATCCAGAGTTGCTCAGG
GCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTT
ATCTTGGTAAGCTTCAGGGATTCAATACTCGATTGTATAGGTCTAGCTCT
CTGACTGGTTTCTGATCACAGATTTATTCTGGGCTTTCACGGACTCTTTC
TATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCAT
CTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATA
CCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTT
TTCCCGCACGACTATAGCGTCTCAGAGGTAAACCCCCTGGCAGGACATTT
GTCACACCTCATCTGACCTTTCTAGATTCTTTGGACGTTCTCTATATGGC
TCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGG
GAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCG
TGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACT
TTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCT
GATTTCTTTTATATCTATTACACCAAGTGAGTCCCAGCAAGTTTCCTCTA
TCAGTACCCAGGGGCGCTAACTGTCATACAGGGTTATGAAGGGTAAGAAG
TTCTCATTGCCTGTTTAA
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Coding sequence (CDS) from alignment at ch1:1585282..1586199-

>KYF_000681-T1 ID=KYF_000681-T1|Name=KYF_000681-T1|organism=Aspergillus niger KYF3|type=CDS|length=3852bp|location=Sequence derived from alignment at ch1:1585282..1586199- (Aspergillus niger KYF3)
GGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGT
TCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTT
CAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTT
GGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCG
CAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACA
CTCTTATATTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGG
CTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGC
TCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCA
TGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTG
CTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGC
TCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAAC
GCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGC
AGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGA
AGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATA
TGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCAC
TGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGT
ATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGC
CACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATA
TTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACG
GACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGC
TTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCA
ACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTG
GCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCT
TTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATC
TTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATG
AAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAG
AAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGA
GTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGG
CGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCC
CTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCA
GCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATT
TCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTT
CTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCA
TCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGAT
ACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCT
TTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCA
AGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGAC
TTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTC
AAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTC
ATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGG
CTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACC
ATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACAT
CCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCC
CTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTAT
ATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATA
CGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTC
ATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAA
AGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGC
ACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAG
GCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCA
TCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGA
ATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTG
TTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTG
CCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAAC
GCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATT
GGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTA
GCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTA
CACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTT
AAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAA
CGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGT
ATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTAT
AGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATA
TTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGT
CTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTC
AGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATT
CTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCT
TTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATC
TTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTAT
CGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTAT
CATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTACACCAAAT
TTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCT
GTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATA
AGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTC
GGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTC
AGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGG
TTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTC
ATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046923ER retention sequence binding
Vocabulary: Biological Process
TermDefinition
GO:0006621protein retention in ER lumen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KDELR2KYF_000681Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000681-T1KYF_000681-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000681-T1.cdsKYF_000681-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000681-T1.exon6KYF_000681-T1.exon6Aspergillus niger KYF3exon
KYF_000681-T1.exon5KYF_000681-T1.exon5Aspergillus niger KYF3exon
KYF_000681-T1.exon4KYF_000681-T1.exon4Aspergillus niger KYF3exon
KYF_000681-T1.exon3KYF_000681-T1.exon3Aspergillus niger KYF3exon
KYF_000681-T1.exon2KYF_000681-T1.exon2Aspergillus niger KYF3exon
KYF_000681-T1.exon1KYF_000681-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR000133
DBxrefPFAM:PF00810
ProductER lumen protein-retaining receptor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1585282..1586199 -
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