You are here

Home

KYF_000689-T1, KYF_000689-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000689-T1
Unique NameKYF_000689-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1698055..1698901+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000689-T1 ID=KYF_000689-T1|Name=KYF_000689-T1|organism=Aspergillus niger KYF3|type=mRNA|length=847bp|location=Sequence derived from alignment at ch1:1698055..1698901+ (Aspergillus niger KYF3)
ATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCA
CCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAA
AGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAA
AGGTCGGTTGAGCTCCCATTGAACCAGGTTTTAATGCTGAAACTAATGGA
AATCAAAGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACAT
CTCCGGGAGATATTCGGTGGTTTTGGCGACATACAAAGTCTTGATCTCCC
TATGAATAAAGCTTGTAAACTCTCTAGACTTATGCTCTCCTAGGTGCCTA
GGCTGACGCCTCACTAGTCATGACAAACAGGGGCACCGCATACATACTTT
ACCACGATCCTGCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCT
CAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTCTTCCTAGGAGAGC
CTTCTCTCGCTCACCACCACCAGTTCAACATAGCAGAGGAAGCTTTGGCC
GTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCG
CCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGA
CATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTCTC
GATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACA
CATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTA
CAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGA
back to top

Coding sequence (CDS) from alignment at ch1:1698055..1698901+

>KYF_000689-T1 ID=KYF_000689-T1|Name=KYF_000689-T1|organism=Aspergillus niger KYF3|type=CDS|length=2772bp|location=Sequence derived from alignment at ch1:1698055..1698901+ (Aspergillus niger KYF3)
ATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCA
CCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAA
AGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAA
AGGTCGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACATCT
CCGGGAGATATTCGGTGGTTTTGGCGACATACAAAGTCTTGATCTCCCTA
TGAATAAAGCTTTCATGACAAACAGGGGCACCGCATACATACTTTACCAC
GATCCTGCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCTCAGCT
AGATGGTGCCATGCTGAACTTCAACATAGCAGAGGAAGCTTTGGCCGTCC
AGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCGCCGC
CACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGACATC
TATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTCTCGATC
CCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACACATT
CGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGC
AGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGAATGCTCA
CCGTTCCAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCACCATCCC
GTAGTCGAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAAAGACTAC
AGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAAAGGTCGA
TAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACATCTCCGGGAG
ATATTCGGTGGTTTTGGCGACATACAAAGTCTTGATCTCCCTATGAATAA
AGCTTTCATGACAAACAGGGGCACCGCATACATACTTTACCACGATCCTG
CGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCTCAGCTAGATGGT
GCCATGCTGAACTTCAACATAGCAGAGGAAGCTTTGGCCGTCCAGGACAC
GGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCGC
TAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGACATCTATAGGC
CTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTCTCGATCCCTTTCT
TCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACACATTCGCGTAT
GGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATG
GCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGAATGCTCACCGTTCC
AGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCACCATCCCGTAGTCG
AAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAAAGACTACAGCCGGA
CTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAAAGGTCGATAGTTAT
CGAAAAGTTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCG
GTGGTTTTGGCGACATACAAAGTCTTGATCTCCCTATGAATAAAGCTTTC
ATGACAAACAGGGGCACCGCATACATACTTTACCACGATCCTGCGGATGC
AGAGGCGGCCATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGC
TGAACTTCAACATAGCAGAGGAAGCTTTGGCCGTCCAGGACACGGCCGCG
GACCTCCGTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCGCTAGGAGG
TATCGCCGTTCTCGGCATATGGAAAGGCATGACATCTATAGGCCTCGCTC
TCTGTCGCGCTCCAGGTCGCCACGCCGTTCTCGATCCCTTTCTTCCAAGT
CTCTCTCAAACTCCCCACCGCCAAGACGGACACATTCGCGTATGGACAGC
TCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATGGCTATAG
CAGTCGCAGTGATAGGGACCGGAGTATGAATGCTCACCGTTCCAGAAGCT
GGTCGCGATCATCGTCGCACAACCAAGCACCATCCCGTAGTCGAAGCCGA
AGTGAAACTCCCAGACGTTACAGGAAAAAAGACTACAGCCGGACTCCGAG
TCCCTCTGCCGATGCTTCAAGAAGCTCAAAGGTCGATAGTTATCGAAAAG
TTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCGGTGGTTT
TGGCGACATACAAAGTCTTGATCTCCCTATGAATAAAGCTTTCATGACAA
ACAGGGGCACCGCATACATACTTTACCACGATCCTGCGGATGCAGAGGCG
GCCATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGCTGAACTT
CAACATAGCAGAGGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCC
GTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCGCTAGGAGGTATCGCC
GTTCTCGGCATATGGAAAGGCATGACATCTATAGGCCTCGCTCTCTGTCG
CGCTCCAGGTCGCCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTC
AAACTCCCCACCGCCAAGACGGACACATTCGCGTATGGACAGCTCTCAGC
GTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATGGCTATAGCAGTCGC
AGTGATAGGGACCGGAGTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000689KYF_000689Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000689-T1.exon1KYF_000689-T1.exon1Aspergillus niger KYF3exon
KYF_000689-T1.exon2KYF_000689-T1.exon2Aspergillus niger KYF3exon
KYF_000689-T1.exon3KYF_000689-T1.exon3Aspergillus niger KYF3exon
KYF_000689-T1.exon4KYF_000689-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000689-T1.cdsKYF_000689-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000689-T1KYF_000689-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034201
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1698055..1698901 +
Powered by Drupal