You are here

Home

KYF_000694-T1, KYF_000694-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000694-T1
Unique NameKYF_000694-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1711176..1712103+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000694-T1 ID=KYF_000694-T1|Name=KYF_000694-T1|organism=Aspergillus niger KYF3|type=mRNA|length=928bp|location=Sequence derived from alignment at ch1:1711176..1712103+ (Aspergillus niger KYF3)
ATGGAAAAAGATGTGGGCTACTCAAACCCATCAATGGATCAGGATGATAC
ATTGTTCGATTATGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTG
TGGATCCCAAGAGGGATGAACCTATTGCTGCACCAGTATTAGGTCTGGAT
GAAAAGGTCACAATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGA
GAGCCGGTGAGACTGACATCCGGCGTAGCGCTCTGAATACAGGCTTATTG
CTTCCTAGGTTACTGTCACACGCCGGAATACCAAAACTGCGTTCTACAGC
GAAGTCGAAACTGAAATTCAAAGGCAAAGGGCATGAGGTCTGCTAGAACC
GATTTGTATAGTCGCCGAGGGACCACTGCGTGGCTAACTGTTTTTCAAAG
TTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTATGGCTCGATGA
TTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTATGATAGAGAAAC
TGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAATGGATAGACGAG
GAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAA
ATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTATTGGGCATCTTG
AAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGGCACAGGCGCCC
CCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCT
ACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAA
TCATAGAAGAAGGTGCTCATGAAAATAATGATGATGATGATGATGATGAG
CTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACAATAA
TCTGGCAGGATCAGATATAAGGGCTTGA
back to top

Coding sequence (CDS) from alignment at ch1:1711176..1712103+

>KYF_000694-T1 ID=KYF_000694-T1|Name=KYF_000694-T1|organism=Aspergillus niger KYF3|type=CDS|length=2439bp|location=Sequence derived from alignment at ch1:1711176..1712103+ (Aspergillus niger KYF3)
ATGGAAAAAGATGTGGGCTACTCAAACCCATCAATGGATCAGGATGATAC
ATTGTTCGATTATGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTG
TGGATCCCAAGAGGGATGAACCTATTGCTGCACCAGTATTAGGTCTGGAT
GAAAAGGTCACAATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGA
GAGCCGGTTACTGTCACACGCCGGAATACCAAAACTGCGTTCTACAGCGA
AGTCGAAACTGAAATTCAAAGGCAAAGGGCATGAGTTTTCGGATGCCGCT
CGACTCTTAAATTTTTATCAACTATGGCTCGATGATTTGTTCCCTCGTGC
GAAGTTCGCCGATGGATTGGCTATGATAGAGAAACTGGGTCACTCGAAAC
GCTTGCAGACGATGCGAAGAGAATGGATAGACGAGGAAAAGCCGAGACTT
TCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAAATCTTCGAGCCCACA
TACCCGTGACAATAGTATGCCTATTGGGCATCTTGAAAAAGCCAACGCTA
TCATAGGCCGAGGAGATAACGTGGCACAGGCGCCCCCAACACAGGGCCTT
GGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCTACAACAGGAGGATTT
GTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAATCATAGAAGAAGGTG
CTCATGAAAATAATGATGATGATGATGATGATGAGCTGGAAGCACTTCTT
CGGGAGCACGAGGATGGTTTTATTGGTAACAATAATCTGGCAGGATCAGA
TATAAGGGCTTGAATGGAAAAAGATGTGGGCTACTCAAACCCATCAATGG
ATCAGGATGATACATTGTTCGATTATGATGCCGGCTTAGAGGGCACATTG
CAAGATATAGCTGTGGATCCCAAGAGGGATGAACCTATTGCTGCACCAGT
ATTAGGTCTGGATGAAAAGGTCACAATCACTAAGCAGCGACGATTTACAG
TCAAGTTGGATGAGAGCCGGTTACTGTCACACGCCGGAATACCAAAACTG
CGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGCAAAGGGCATGAGTT
TTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTATGGCTCGATGATT
TGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTATGATAGAGAAACTG
GGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAATGGATAGACGAGGA
AAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAAAT
CTTCGAGCCCACATACCCGTGACAATAGTATGCCTATTGGGCATCTTGAA
AAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGGCACAGGCGCCCCC
AACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCTAC
AACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAATC
ATAGAAGAAGGTGCTCATGAAAATAATGATGATGATGATGATGATGAGCT
GGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACAATAATC
TGGCAGGATCAGATATAAGGGCTTGAATGGAAAAAGATGTGGGCTACTCA
AACCCATCAATGGATCAGGATGATACATTGTTCGATTATGATGCCGGCTT
AGAGGGCACATTGCAAGATATAGCTGTGGATCCCAAGAGGGATGAACCTA
TTGCTGCACCAGTATTAGGTCTGGATGAAAAGGTCACAATCACTAAGCAG
CGACGATTTACAGTCAAGTTGGATGAGAGCCGGTTACTGTCACACGCCGG
AATACCAAAACTGCGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGCA
AAGGGCATGAGTTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTA
TGGCTCGATGATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTAT
GATAGAGAAACTGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAAT
GGATAGACGAGGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCG
CAACAAGCGAAATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTAT
TGGGCATCTTGAAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGG
CACAGGCGCCCCCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTA
GGAGGCATTCTACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGT
TCCAAGGGAAATCATAGAAGAAGGTGCTCATGAAAATAATGATGATGATG
ATGATGATGAGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATT
GGTAACAATAATCTGGCAGGATCAGATATAAGGGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0048478replication fork protection
GO:0006974cellular response to DNA damage stimulus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000694KYF_000694Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000694-T1.exon1KYF_000694-T1.exon1Aspergillus niger KYF3exon
KYF_000694-T1.exon2KYF_000694-T1.exon2Aspergillus niger KYF3exon
KYF_000694-T1.exon3KYF_000694-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000694-T1.cdsKYF_000694-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000694-T1KYF_000694-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012923
DBxrefPFAM:PF07962
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1711176..1712103 +
Powered by Drupal