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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2204901..2206236- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000869-T1 ID=KYF_000869-T1|Name=KYF_000869-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1336bp|location=Sequence derived from alignment at ch1:2204901..2206236- (Aspergillus niger KYF3)
ATGAGATCCTCCCAGTCCAAGCGGAGGCAGCAGCCTCCTCCACGCAAGAA
GGCCTGCCAAAGCTGCACCAAATCAAAAGTCCGATGTGACTTGGACAGGC
CAGCTTGCTCTCGTTGCCGGTCGCTTGGTCGGACCTGCGAATACCTGACG
CATCCTCCGGTTACCAGTCCTCCGAGCGAGCCCAACTACACATCACCCAC
CGACACTACCGAGAGAGAGCCAGTGTTGCCGATATACAGCACGCCACAGA
TAGCTCCGATCTCAGAGTTGCCGATATCCCTGCCATACTCTTTCAGCAGT
CCGGCTTGGACCCCTCCACATCCGTCCCGCAGGCTAGTAGCCGACAGTGT
GCGTGGTGAGAGTAATGAACTCGACTTCACGGGGATTGAGCTAGTTCCGA
GTGTGAATGCAGAAAGTATCAGGGATCGATGGCTGCGACCGTATATTTTG
CCTCCACTGGGTCGTGATGAGGTCCCGAAGGCCTATCATCCGTTCACTTT
GCAGTACATCTCGAGGATTTTGAGTACATATCCCCGGTTTATGGTGAAGG
ATGGCGATGTGCCACCGATAATCCATCGAATGCAGATTGTTGGGCGCAGA
ATGCCCCGTGCTTTGGCGAATTGTTACAGTCTGGTGCGGATGTGGGAGCA
AGCTGCGGAGGGAAGTGAAACCTTGGTGGTAGAAACTGTAGAGAAAGAGA
TGGATCGACTAGCCAGCGAGGTATGATTGATCATTGTATACTATTGCTGC
AAACGAGGCAGCAGCTGACATGGAACAGGAACCGCCTAGTCTAGATGACT
TCGATCTTCTTGCTATTTTCCAAGCATACCTGATCTACTCTGTAATGTTA
TACTTCTCGCCTATAGCGGGAGCCAATGCCGTCAACGACAAAATCATGAT
AACTCTCATGGAATTGGCGTTCCGTACTGCTCGAAATGGGCTCTTCTGCA
CCGCCGAGATGTCTCATACCAGACCCAGCTGGGAGTCGTGGATCGTGGCG
GCCGCCAAGCGGCGATCGCTCTTTACGATGTACCTGTTCTGCAGCGTTTA
CAATGCCGATCGACTTTTACCAAATTTTATTGCAGACGAGATGACTGGTG
TTTTCGCCCCTGAAGCCAAAGCATTGTGGGAAGCCACTTCTCGTGAGACA
TGGGCGAAAGAGTACGATCGGCATCTTCTTAATTGGGAAGACGGGATGCT
TGAGATCTCGGAGTTGTGGAGATCTGCGGAGACAGGAACACCGCGACGGA
GAGAACGGATCGAGCGGTGGCTAAGGACAGTGGACGAATTTGGGATGACA
ATGTTTGGGGTTACTGCTCATGTGCATGGATGCTGA back to topCoding sequence (CDS) from alignment at ch1:2204901..2206236- >KYF_000869-T1 ID=KYF_000869-T1|Name=KYF_000869-T1|organism=Aspergillus niger KYF3|type=CDS|length=2556bp|location=Sequence derived from alignment at ch1:2204901..2206236- (Aspergillus niger KYF3)
GAACCGCCTAGTCTAGATGACTTCGATCTTCTTGCTATTTTCCAAGCATA
CCTGATCTACTCTGTAATGTTATACTTCTCGCCTATAGCGGGAGCCAATG
CCGTCAACGACAAAATCATGATAACTCTCATGGAATTGGCGTTCCGTACT
GCTCGAAATGGGCTCTTCTGCACCGCCGAGATGTCTCATACCAGACCCAG
CTGGGAGTCGTGGATCGTGGCGGCCGCCAAGCGGCGATCGCTCTTTACGA
TGTACCTGTTCTGCAGCGTTTACAATGCCGATCGACTTTTACCAAATTTT
ATTGCAGACGAGATGACTGGTGTTTTCGCCCCTGAAGCCAAAGCATTGTG
GGAAGCCACTTCTCGTGAGACATGGGCGAAAGAGTACGATCGGCATCTTC
TTAATTGGGAAGACGGGATGCTTGAGATCTCGGAGTTGTGGAGATCTGCG
GAGACAGGAACACCGCGACGGAGAGAACGGATCGAGCGGTGGCTAAGGAC
AGTGGACGAATTTGGGATGACAATGTTTGGGGTTACTGCTCATGTGCATG
GATGCTGAATGAGATCCTCCCAGTCCAAGCGGAGGCAGCAGCCTCCTCCA
CGCAAGAAGGCCTGCCAAAGCTGCACCAAATCAAAAGTCCGATGTGACTT
GGACAGGCCAGCTTGCTCTCGTTGCCGGTCGCTTGGTCGGACCTGCGAAT
ACCTGACGCATCCTCCGGTTACCAGTCCTCCGAGCGAGCCCAACTACACA
TCACCCACCGACACTACCGAGAGAGAGCCAGTGTTGCCGATATACAGCAC
GCCACAGATAGCTCCGATCTCAGAGTTGCCGATATCCCTGCCATACTCTT
TCAGCAGTCCGGCTTGGACCCCTCCACATCCGTCCCGCAGGCTAGTAGCC
GACAGTGTGCGTGGTGAGAGTAATGAACTCGACTTCACGGGGATTGAGCT
AGTTCCGAGTGTGAATGCAGAAAGTATCAGGGATCGATGGCTGCGACCGT
ATATTTTGCCTCCACTGGGTCGTGATGAGGTCCCGAAGGCCTATCATCCG
TTCACTTTGCAGTACATCTCGAGGATTTTGAGTACATATCCCCGGTTTAT
GGTGAAGGATGGCGATGTGCCACCGATAATCCATCGAATGCAGATTGTTG
GGCGCAGAATGCCCCGTGCTTTGGCGAATTGTTACAGTCTGGTGCGGATG
TGGGAGCAAGCTGCGGAGGGAAGTGAAACCTTGGTGGTAGAAACTGTAGA
GAAAGAGATGGATCGACTAGCCAGCGAGGAACCGCCTAGTCTAGATGACT
TCGATCTTCTTGCTATTTTCCAAGCATACCTGATCTACTCTGTAATGTTA
TACTTCTCGCCTATAGCGGGAGCCAATGCCGTCAACGACAAAATCATGAT
AACTCTCATGGAATTGGCGTTCCGTACTGCTCGAAATGGGCTCTTCTGCA
CCGCCGAGATGTCTCATACCAGACCCAGCTGGGAGTCGTGGATCGTGGCG
GCCGCCAAGCGGCGATCGCTCTTTACGATGTACCTGTTCTGCAGCGTTTA
CAATGCCGATCGACTTTTACCAAATTTTATTGCAGACGAGATGACTGGTG
TTTTCGCCCCTGAAGCCAAAGCATTGTGGGAAGCCACTTCTCGTGAGACA
TGGGCGAAAGAGTACGATCGGCATCTTCTTAATTGGGAAGACGGGATGCT
TGAGATCTCGGAGTTGTGGAGATCTGCGGAGACAGGAACACCGCGACGGA
GAGAACGGATCGAGCGGTGGCTAAGGACAGTGGACGAATTTGGGATGACA
ATGTTTGGGGTTACTGCTCATGTGCATGGATGCTGAATGAGATCCTCCCA
GTCCAAGCGGAGGCAGCAGCCTCCTCCACGCAAGAAGGCCTGCCAAAGCT
GCACCAAATCAAAAGTCCGATGTGACTTGGACAGGCCAGCTTGCTCTCGT
TGCCGGTCGCTTGGTCGGACCTGCGAATACCTGACGCATCCTCCGGTTAC
CAGTCCTCCGAGCGAGCCCAACTACACATCACCCACCGACACTACCGAGA
GAGAGCCAGTGTTGCCGATATACAGCACGCCACAGATAGCTCCGATCTCA
GAGTTGCCGATATCCCTGCCATACTCTTTCAGCAGTCCGGCTTGGACCCC
TCCACATCCGTCCCGCAGGCTAGTAGCCGACAGTGTGCGTGGTGAGAGTA
ATGAACTCGACTTCACGGGGATTGAGCTAGTTCCGAGTGTGAATGCAGAA
AGTATCAGGGATCGATGGCTGCGACCGTATATTTTGCCTCCACTGGGTCG
TGATGAGGTCCCGAAGGCCTATCATCCGTTCACTTTGCAGTACATCTCGA
GGATTTTGAGTACATATCCCCGGTTTATGGTGAAGGATGGCGATGTGCCA
CCGATAATCCATCGAATGCAGATTGTTGGGCGCAGAATGCCCCGTGCTTT
GGCGAATTGTTACAGTCTGGTGCGGATGTGGGAGCAAGCTGCGGAGGGAA
GTGAAACCTTGGTGGTAGAAACTGTAGAGAAAGAGATGGATCGACTAGCC
AGCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.9 |
| Note | antiSMASH:Cluster_1.10 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2204901..2206236 - |
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