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KYF_001039-T1, KYF_001039-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001039-T1
Unique NameKYF_001039-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2689780..2690589-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001039-T1 ID=KYF_001039-T1|Name=KYF_001039-T1|organism=Aspergillus niger KYF3|type=mRNA|length=810bp|location=Sequence derived from alignment at ch1:2689780..2690589- (Aspergillus niger KYF3)
ATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGT
CCAGCGTCCCGCCGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCG
CCGCCGCCGCTCCCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACC
GCAGTCGCTGCTGCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTC
CTCCTCCATCCTCCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCT
ACAACCAAGTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCC
CGGTCTCCGGCGCTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAA
GACGGGTATTACGAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGG
CGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGT
GAAGGTGAGATCACTTTCCTCCATTCGTTTTTTTGTGGTTCGGGTTGGGG
ATCGGGGGTGAGGAGAATGAGAATAGATGGGGATAATGGAATTGAGCGAG
AGAGGCTAATATCTCTGGTCTGTGTGTAGGACACAATATCCAGCAGCACA
GTGTCGTTATGGTCCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAG
TACCATTTGGTTCGTGGTGCTATGGATTTGGTAGGTTTACTTTCTGATAT
GGGTTTCCTGGGAATTCGGGGGTAGGTTTGCTAACTTCTCTCAGGGTGGT
GTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAA
GAAGGACTAG
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Coding sequence (CDS) from alignment at ch1:2689780..2690589-

>KYF_001039-T1 ID=KYF_001039-T1|Name=KYF_001039-T1|organism=Aspergillus niger KYF3|type=CDS|length=1863bp|location=Sequence derived from alignment at ch1:2689780..2690589- (Aspergillus niger KYF3)
GGTGGTGTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAA
GCCTAAGAAGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGT
CCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTC
GTGGTGCTATGGATTTGATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGC
ACGCTCCGGACCCTGGTCCAGCGTCCCGCCGCCATTAAATCCACCTCCTG
CTCCATCACCACCCTCGCCGCCGCCGCTCCCCGACGACCTTTCCAGCCTG
TTCTCCGCACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCACGCAAGACC
TCCATCCCCTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCCACCTCCCC
GTTCCGCCAGGCTACCTACAACCAAGTGCGGCGCGGATGCCGTGTTGCGC
AGCGCGCACGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGTCTCAGATG
AAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAACTC
CGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTA
CGGCTTATATTCCTGGTGAAGGGTGGTGTTGCTTCTCGGTTGAACAGTCG
GTCCAAGTATGGTACGAAGAAGCCTAAGAAGGACTAGGACACAATATCCA
GCAGCACAGTGTCGTTATGGTCCGTGGTGGTCGTGTGCCTGATTGTCCTG
GTGTGAAGTACCATTTGGTTCGTGGTGCTATGGATTTGATGGCCCCTCTC
GTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGTCCAGCGTCCCGC
CGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCGCCGCCGCCGCTC
CCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACCGCAGTCGCTGCT
GCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTCCTCCTCCATCCT
CCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCTACAACCAAGTGC
GGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCCGGCG
CTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAAGACGGGTATTAC
GAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGT
TGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTGGTGT
TGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAAGA
AGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTG
GTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCT
ATGGATTTGATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCG
GACCCTGGTCCAGCGTCCCGCCGCCATTAAATCCACCTCCTGCTCCATCA
CCACCCTCGCCGCCGCCGCTCCCCGACGACCTTTCCAGCCTGTTCTCCGC
ACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCACGCAAGACCTCCATCCC
CTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCCACCTCCCCGTTCCGCC
AGGCTACCTACAACCAAGTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCA
CGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGTCTCAGATGAAGGGAGT
GTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAACTCCGGTGAGC
GGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTACGGCTTAT
ATTCCTGGTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001039KYF_001039Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001039-T1KYF_001039-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001039-T1.cdsKYF_001039-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001039-T1.exon3KYF_001039-T1.exon3Aspergillus niger KYF3exon
KYF_001039-T1.exon2KYF_001039-T1.exon2Aspergillus niger KYF3exon
KYF_001039-T1.exon1KYF_001039-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG092653KS
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005679
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2689780..2690589 -
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