|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2724305..2725875- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001052-T1 ID=KYF_001052-T1|Name=KYF_001052-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1571bp|location=Sequence derived from alignment at ch1:2724305..2725875- (Aspergillus niger KYF3)
ATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAATCAACTCTCAA
CCTCACCCGAACAACCCGCCCAGTCCAACGACGACCGCTCCTGCCCGCCG
TTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCTCCATCTGCCTG
CAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCTGATTCCCTCAA
AGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGATGCAAGCCCAGTCATAG
CTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGGGGAGTCAGCAA
CAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACACAAAGCCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAGCGAGGCCAATG
GAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAACGCAGG
TCACAATTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAGTCCAA
CATTTTCGTGGCAGGACAGCGATTGAATGATCTTACGGGCTATTCGGCGA
TCGAAATGTTGAAGAAGGAGATTCACAGACAAGGTATGTGGCACCCATAT
TCCATAACTTAATCATTAGAACTATTGTTTCTAACCTTTGACATGGGTGA
ATAGAGGAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGA
TGCCTACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCA
ATGAGCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGA
TTCACCCACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGA
AGCACAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTG
CACAATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGG
TCGGACAAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGG
CGTCAACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGC
GTCGCAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATT
GAGAAGGAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCA
GATGGCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTG
AGACCGCTGAGACCGCAGAGACCGCAGAACCATCTGCCTCTCCCGCAGAT
GAGCCAATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACC
AGAGGTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCA
TAGTCAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAG
CTCGCGCGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGA
TCTCTTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTG
TTGCTCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCG
ATGATTATTCGGCAACGGTGA back to topCoding sequence (CDS) from alignment at ch1:2724305..2725875- >KYF_001052-T1 ID=KYF_001052-T1|Name=KYF_001052-T1|organism=Aspergillus niger KYF3|type=CDS|length=3000bp|location=Sequence derived from alignment at ch1:2724305..2725875- (Aspergillus niger KYF3)
AGGAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCC
TACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGA
GCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCA
CCCACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCA
CAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACA
ATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGG
ACAAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTC
AACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCG
CAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGA
AGGAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATG
GCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGAC
CGCTGAGACCGCAGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGC
CAATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAG
GTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGT
CAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCG
CGCGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTC
TTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGC
TCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGA
TTATTCGGCAACGGTGAATGCAGTCTATGCCATTGCTGCTCAGGCAGTCC
TTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTCCAACGACG
ACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGA
ACTTCTCCATCTGCCTGCAATGTCAATTCCGAACCCAGTCCTCGCTTTAC
TCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGA
TGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCG
ATGCGGGGAGTCAGCAACAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAA
AGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGA
GAAGAGCGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCT
ACATAGAGCAACGCAGGTCACAATTCACAAAGCGGTTCAGTGATGTGATG
GACAACCTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGATCT
TACGGGCTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAG
AGGAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCC
TACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGA
GCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCA
CCCACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCA
CAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACA
ATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGG
ACAAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTC
AACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCG
CAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGA
AGGAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATG
GCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGAC
CGCTGAGACCGCAGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGC
CAATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAG
GTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGT
CAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCG
CGCGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTC
TTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGC
TCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGA
TTATTCGGCAACGGTGAATGCAGTCTATGCCATTGCTGCTCAGGCAGTCC
TTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTCCAACGACG
ACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGA
ACTTCTCCATCTGCCTGCAATGTCAATTCCGAACCCAGTCCTCGCTTTAC
TCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGA
TGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCG
ATGCGGGGAGTCAGCAACAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAA
AGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGA
GAAGAGCGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCT
ACATAGAGCAACGCAGGTCACAATTCACAAAGCGGTTCAGTGATGTGATG
GACAACCTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGATCT
TACGGGCTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264LJU |
| DBxref | InterPro:IPR008839 |
| DBxref | PFAM:PF05546 |
| Product | sensitivity to high expression protein she9 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2724305..2725875 - |
|
