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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2895727..2897114- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001109-T1 ID=KYF_001109-T1|Name=KYF_001109-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1388bp|location=Sequence derived from alignment at ch1:2895727..2897114- (Aspergillus niger KYF3)
ATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCC
GCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGA
AGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTAT
GAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACT
GCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAG
GCCTCGAGACCTGTATGATCATCGCATCTATTCTGGGCTATATCAGTGTC
AATACTGATGATTTGCTGCAGATGAACCATCCAACGACCAACAAGCACGA
GGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAA
GGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGG
TACAGTCACAGGCCGAGCGGGCTTGATGGGTTACACGCATCACTGACGTC
TCCCAGATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAA
ACCACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGA
AAGGTATTGCTACAGATCTAGTCGCCTGTCACTCTGGATTCACACTGGTA
TCGAATCCCCGTACTTCATTGATGCTAACCTAGTTTTCTTTTGTCACGAA
TTCAGCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTG
TCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGT
CGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTC
TCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCT
ATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGA
GGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATA
CCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACG
CCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCT
GGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAG
AGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACC
GTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGT
TATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAG
GTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATG
ATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGA back to topCoding sequence (CDS) from alignment at ch1:2895727..2897114- >KYF_001109-T1 ID=KYF_001109-T1|Name=KYF_001109-T1|organism=Aspergillus niger KYF3|type=CDS|length=4680bp|location=Sequence derived from alignment at ch1:2895727..2897114- (Aspergillus niger KYF3)
CTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTG
GTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTT
TGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGAC
CTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGT
GGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATT
CCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAG
GTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCT
TCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGG
CGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAAC
CCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGAT
CGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGTTATCG
CTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAGGTACG
GAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATGATTCG
TATGATGACCCCCGTGCGAAGAGAAGATACTGAATTCGCATCGTGAAAGA
CACCGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGATATGCTTTTA
TTGTCTATGAGCGCGAAAAGGATATGAAAGATGAACCATCCAACGACCAA
CAAGCACGAGGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTA
CGATGTCAAGGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTA
TTGAACGGATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAA
CCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGA
CTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGA
AGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAG
CGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATT
GACGGAAGGCCTCGAGACCTCTGCCTACAAGGAAACGGATGGTATCCGCA
TCAAGGACCGCCGTGTCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAG
GGATGGAAGCCTCGTCGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACAC
CAAGGCTTTGCCGTCTCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCT
CTGGTCCCGGCGGCTATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGA
GGTGGTTTCAAGGGAGGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCG
CGGGGGTGTTGGATACCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGAC
AGGCTCCCCCCAACGCCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGG
TTTGGTGGTCCCCCTGGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGC
CACTGGCAGCAACAGAGAACCCATCAGGCCCCGGGACGGGTTTGGCGACC
GCGATCGTCGAGACCGTGATCGGGACCGCGACGGTGACCGTCACCGGGAC
CGTGATCGGGATAGTTATCGCTACCGTGACCGCGACCGTGAACGCGACCG
CGATCGTGGTGACAGGTACGGAGGCCGGGGCGACGACTACGGGCGGAAGC
GATACCATGAAGATGATTCGTATGATGACCCCCGTGCGAAGAGAAGATAC
TGAATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACC
ACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAG
ATGAACCATCCAACGACCAACAAGCACGAGGCGACCCGTTCAAGACGCTG
TTTGTCGCTAGACTGAGCTACGATGTCAAGGAATCGGACCTGGAACGGGA
ATTTGGTCGTTTCGGCCCTATTGAACGGATGACGGACAAGCTCCCCCCTC
CGCTTCTGGCGCTCTTCCAACCTCGCCCGCCTCTGCGTTATGTCACCCCC
ATCAACCGTGCCCCAGAAGACTGCAAGAAGAGTAGCATCGGTGGTATTGC
GCAGTTCCTTCCTGAGGTGAAGAAGTATGAGGAAGAGATCCCATATACGC
CTACGGAAAGCTGGATCCAGCGCAAACTGCGCCAGAAAGTGGAGAAGAAA
GAGAACATTAACAAGCAATTGACGGAAGGCCTCGAGACCTCTGCCTACAA
GGAAACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTGGTAGACGTCG
AGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTTTGGTGGTGGT
CTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGACCTATCGGCCC
TGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGTGGTGGATTCC
GGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATTCCGCGGTGAC
CGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAGGTGGTCGCAA
CGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCTTCAGGTCCGG
GAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGGCGGCAGATTT
GAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAACCCATCAGGCC
CCGGGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGATCGGGACCGCG
ACGGTGACCGTCACCGGGACCGTGATCGGGATAGTTATCGCTACCGTGAC
CGCGACCGTGAACGCGACCGCGATCGTGGTGACAGGTACGGAGGCCGGGG
CGACGACTACGGGCGGAAGCGATACCATGAAGATGATTCGTATGATGACC
CCCGTGCGAAGAGAAGATACTGAATTCGCATCGTGAAAGACACCGTAACG
CCAAAGGGCTCGAAGAAACCACACAGGGGATATGCTTTTATTGTCTATGA
GCGCGAAAAGGATATGAAAGATGAACCATCCAACGACCAACAAGCACGAG
GCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAAG
GAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGAT
GACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCCGC
CTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGAAG
AGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTATGA
GGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACTGC
GCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAGGC
CTCGAGACCTCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCG
CCGTGTCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGC
CTCGTCGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTG
CCGTCTCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGG
CGGCTATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCA
AGGGAGGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTT
GGATACCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCC
CAACGCCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTC
CCCCTGGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGC
AACAGAGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCG
AGACCGTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGG
ATAGTTATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGT
GACAGGTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGA
AGATGATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGAATTCGCA
TCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGA
TATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAGATGAACCATC
CAACGACCAACAAGCACGAGGCGACCCGTTCAAGACGCTGTTTGTCGCTA
GACTGAGCTACGATGTCAAGGAATCGGACCTGGAACGGGAATTTGGTCGT
TTCGGCCCTATTGAACGGATGACGGACAAGCTCCCCCCTCCGCTTCTGGC
GCTCTTCCAACCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCGTG
CCCCAGAAGACTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCCTT
CCTGAGGTGAAGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAAAG
CTGGATCCAGCGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACATTA
ACAAGCAATTGACGGAAGGCCTCGAGACCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030619 | U1 snRNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264G1F |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034143 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR022023 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF12220 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2895727..2897114 - |
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