You are here

Home

KYF_001213-T1, KYF_001213-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001213-T1
Unique NameKYF_001213-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3200530..3201851+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001213-T1 ID=KYF_001213-T1|Name=KYF_001213-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1322bp|location=Sequence derived from alignment at ch1:3200530..3201851+ (Aspergillus niger KYF3)
ATGGCTCATTGCGAGCGGGCCTCCAAGCCCCTGCTCCAATGCCTGCAGAA
GACCTACACAAAGGGTCTTCCAGGCCTCCAGCTACAGTCCACCCGCGCCT
TTCAGTCCACCGCTCTGGCTCGCGAGGAAGCCCAGACTGAGGCCAAGAGC
GCTCCCTTCCACAAGGCGCCTGATCCGGCCCTAGTAACGAGTCCCCGGCT
GGAACGGAGGTTGTTACGCCAGGGAATCGCCCCCGTCGGATCTCGTCGAC
GTCGAGCTGCCCTCCAGGGCTCATCCAACATTCCCTTCGAGCAGCTGCCC
TTCCAATGTTTCCAGGAGGCACGCAAGGTTTTGATCGCAGACCGGGAAGA
GAAGGTGCGCGATATCCAGTCGATGAGCGAGAAGATTGCCAGACTTCAGG
CCCTTCCTACCGAGGAGGCCGGCGGCTTGCAGGTCAAGAAATCCAAGCTC
CGGGCCATGGAGCTCCATCTGGAGCACCTCAAGATCCTTGCGGATGTCAA
CGACCCGCTGGTCAAGAAGAAGTTTGAGGATGGGCAAGGTGAGACAACAC
ATTCTACAAATTGCCTTCATCACCGCATCCTAACCGACCTCGTCTAGGTG
ACCTCAGCAAGCCCATCTACCGCTACCTGGCCGATCGGAAATGGAGGGAA
TACCGTCGCAAGATCCTCGTCCAAAGAATCACGCAAATGAAGGTGATTCC
CGACGTCCTTCCTCACTGCGACCCTATCGTGGACACCAAGCTCTACTTCA
ACCGCAGCCAGGTACAGCCTGGAGAATACGTCAACGCCAAGGTCAGCACG
ACGGCACCTAAACTTGACGTGCAGCTCTTCGAGGGCGGCGAGAAGCTCGT
CACCATCGCCGTGGTCGACTCCGATGTTCCCAACGTTGAGAAGGATGGAT
TCGATTTCAAGATGCACTACCTGGCTGTCAACGTCCCCATCTCGGCCACG
AACACCAAGGTCGACCTGGCCCAGCTGTCGGCTGAGTCGCAGGTTGTCCT
GCCCTGGGAGCCCCCTGTAGCTCAGAAGGGAAGCCCCTACCACCGACTGT
CTCTGTTCATTCTCGAACAGAAGGACTCCAAGCCATTGGACTTTGCTGCC
GTCAAGGCGAAGGAGACGAACCGCGAGAACCTGCTGCCCCGCACCCTGCA
GGCCCGGTACCACCTGAAGGCGATTGGCGCGCACCTGTTCCGCACGCAAT
GGGACGAGACGACGTATGAGGTGATGAAGCAGATTGGCTTCCCCGAGGCG
AACATGGAGCTCCGTCGGAAGCGGGTCGAGCCTCTTCCTTACAAGAGAAG
AAACCCATCCACGTTCCGGTAA
back to top

Coding sequence (CDS) from alignment at ch1:3200530..3201851+

>KYF_001213-T1 ID=KYF_001213-T1|Name=KYF_001213-T1|organism=Aspergillus niger KYF3|type=CDS|length=2526bp|location=Sequence derived from alignment at ch1:3200530..3201851+ (Aspergillus niger KYF3)
ATGGCTCATTGCGAGCGGGCCTCCAAGCCCCTGCTCCAATGCCTGCAGAA
GACCTACACAAAGGGTCTTCCAGGCCTCCAGCTACAGTCCACCCGCGCCT
TTCAGTCCACCGCTCTGGCTCGCGAGGAAGCCCAGACTGAGGCCAAGAGC
GCTCCCTTCCACAAGGCGCCTGATCCGGCCCTAGTAACGAGTCCCCGGCT
GGAACGGAGGTTGTTACGCCAGGGAATCGCCCCCGTCGGATCTCGTCGAC
GTCGAGCTGCCCTCCAGGGCTCATCCAACATTCCCTTCGAGCAGCTGCCC
TTCCAATGTTTCCAGGAGGCACGCAAGGTTTTGATCGCAGACCGGGAAGA
GAAGGTGCGCGATATCCAGTCGATGAGCGAGAAGATTGCCAGACTTCAGG
CCCTTCCTACCGAGGAGGCCGGCGGCTTGCAGGTCAAGAAATCCAAGCTC
CGGGCCATGGAGCTCCATCTGGAGCACCTCAAGATCCTTGCGGATGTCAA
CGACCCGCTGGTCAAGAAGAAGTTTGAGGATGGGCAAGGTGACCTCAGCA
AGCCCATCTACCGCTACCTGGCCGATCGGAAATGGAGGGAATACCGTCGC
AAGATCCTCGTCCAAAGAATCACGCAAATGAAGGTGATTCCCGACGTCCT
TCCTCACTGCGACCCTATCGTGGACACCAAGCTCTACTTCAACCGCAGCC
AGGTACAGCCTGGAGAATACGTCAACGCCAAGGTCAGCACGACGGCACCT
AAACTTGACGTGCAGCTCTTCGAGGGCGGCGAGAAGCTCGTCACCATCGC
CGTGGTCGACTCCGATGTTCCCAACGTTGAGAAGGATGGATTCGATTTCA
AGATGCACTACCTGGCTGTCAACGTCCCCATCTCGGCCACGAACACCAAG
GTCGACCTGGCCCAGCTGTCGGCTGAGTCGCAGGTTGTCCTGCCCTGGGA
GCCCCCTGTAGCTCAGAAGGGAAGCCCCTACCACCGACTGTCTCTGTTCA
TTCTCGAACAGAAGGACTCCAAGCCATTGGACTTTGCTGCCGTCAAGGCG
AAGGAGACGAACCGCGAGAACCTGCTGCCCCGCACCCTGCAGGCCCGGTA
CCACCTGAAGGCGATTGGCGCGCACCTGTTCCGCACGCAATGGGACGAGA
CGACGTATGAGGTGATGAAGCAGATTGGCTTCCCCGAGGCGAACATGGAG
CTCCGTCGGAAGCGGGTCGAGCCTCTTCCTTACAAGAGAAGAAACCCATC
CACGTTCCGGTAAATGGCTCATTGCGAGCGGGCCTCCAAGCCCCTGCTCC
AATGCCTGCAGAAGACCTACACAAAGGGTCTTCCAGGCCTCCAGCTACAG
TCCACCCGCGCCTTTCAGTCCACCGCTCTGGCTCGCGAGGAAGCCCAGAC
TGAGGCCAAGAGCGCTCCCTTCCACAAGGCGCCTGATCCGGCCCTAGTAA
CGAGTCCCCGGCTGGAACGGAGGTTGTTACGCCAGGGAATCGCCCCCGTC
GGATCTCGTCGACGTCGAGCTGCCCTCCAGGGCTCATCCAACATTCCCTT
CGAGCAGCTGCCCTTCCAATGTTTCCAGGAGGCACGCAAGGTTTTGATCG
CAGACCGGGAAGAGAAGGTGCGCGATATCCAGTCGATGAGCGAGAAGATT
GCCAGACTTCAGGCCCTTCCTACCGAGGAGGCCGGCGGCTTGCAGGTCAA
GAAATCCAAGCTCCGGGCCATGGAGCTCCATCTGGAGCACCTCAAGATCC
TTGCGGATGTCAACGACCCGCTGGTCAAGAAGAAGTTTGAGGATGGGCAA
GGTGACCTCAGCAAGCCCATCTACCGCTACCTGGCCGATCGGAAATGGAG
GGAATACCGTCGCAAGATCCTCGTCCAAAGAATCACGCAAATGAAGGTGA
TTCCCGACGTCCTTCCTCACTGCGACCCTATCGTGGACACCAAGCTCTAC
TTCAACCGCAGCCAGGTACAGCCTGGAGAATACGTCAACGCCAAGGTCAG
CACGACGGCACCTAAACTTGACGTGCAGCTCTTCGAGGGCGGCGAGAAGC
TCGTCACCATCGCCGTGGTCGACTCCGATGTTCCCAACGTTGAGAAGGAT
GGATTCGATTTCAAGATGCACTACCTGGCTGTCAACGTCCCCATCTCGGC
CACGAACACCAAGGTCGACCTGGCCCAGCTGTCGGCTGAGTCGCAGGTTG
TCCTGCCCTGGGAGCCCCCTGTAGCTCAGAAGGGAAGCCCCTACCACCGA
CTGTCTCTGTTCATTCTCGAACAGAAGGACTCCAAGCCATTGGACTTTGC
TGCCGTCAAGGCGAAGGAGACGAACCGCGAGAACCTGCTGCCCCGCACCC
TGCAGGCCCGGTACCACCTGAAGGCGATTGGCGCGCACCTGTTCCGCACG
CAATGGGACGAGACGACGTATGAGGTGATGAAGCAGATTGGCTTCCCCGA
GGCGAACATGGAGCTCCGTCGGAAGCGGGTCGAGCCTCTTCCTTACAAGA
GAAGAAACCCATCCACGTTCCGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001213KYF_001213Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001213-T1.exon1KYF_001213-T1.exon1Aspergillus niger KYF3exon
KYF_001213-T1.exon2KYF_001213-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001213-T1.cdsKYF_001213-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001213-T1KYF_001213-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262U7S
DBxrefInterPro:IPR035810
DBxrefInterPro:IPR008914
DBxrefInterPro:IPR036610
DBxrefPFAM:PF01161
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3200530..3201851 +
Powered by Drupal