|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3416605..3417556- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001294-T1 ID=KYF_001294-T1|Name=KYF_001294-T1|organism=Aspergillus niger KYF3|type=mRNA|length=952bp|location=Sequence derived from alignment at ch1:3416605..3417556- (Aspergillus niger KYF3)
ATGTCACTTCCATTTCAGGTAGTAGAGGAGACTAATCAGGCCTTTCTGGA
GAGCTGCCGTCACGGTGACTTGGCCCAAGTCAAGAAACATCAGAAGGCTA
AGACTCTAGACCAAGAGGTTCTGACCTTGGGCTTGAGGAAAGCTGCCCAG
GGCGATCATATCGAAACTATGCGCTATCTACTAAATGCAGGCGCCAAACC
CCAGTCTCCCACTGTCGTGGATGAAGTACACTCGGCTGAGGCAGTCAAGG
CTTTGCTAGACAACGGTCTTACTTTTGAGACTCAGTTACACCCTCTAGGT
ACAGTGCCTCTTGTGTGGGTATCCCTTTGCTTGCCTGTTGTTGTTCACAC
AGACTAACCAAAGGAACAGACACATTGTAAAGAAGAACGACCAACGGCTC
GTTCACTGGTGCCTGGAACAAGATGCCGACCCCACCTTCGGCTGCCCGAA
TGCCCAGTCATTCAATGACCTTGAGAAGCCTGATCAGTCTCCTACGAAGG
GCTCAGGGGCAGTCCTTGGCATGGCATCCCGTCGAAGTAGCCCAGAGATT
GTTGACCTCCTTCTTGATCATGGAGCCAACATCCACAACAGTAATGTCCT
ACATTATGCTGCATGTAGGAGAGGCGGACTGGCCATTCCAATGATGGAGC
ACCTGATACAACGTGGGGCCGACGTAAATGAATTCGGCTATCCCGCATTC
CTACATTTCGGTGGCACTCCCCTTCATGCGGCCAGCTACCAAGGGAATCT
ACTGGCCGTGAAGTGGCTCCTAAAGCATGGCGCAAACCCCGGCGTGGAAG
ACGCGCAAGGTAGTAAGCCGCTTGATCTAGCAGCTTTGGAGGAGGAAGAC
GAAATATGTGATGTTCTCTATGAATTGTCGCCATTGGACGACTTTGGGAA
GGGTGAGAATAGTAGCTCAGGCCAGCCGAAAGCGAACAGTTCCAGAGCAT
GA back to topCoding sequence (CDS) from alignment at ch1:3416605..3417556- >KYF_001294-T1 ID=KYF_001294-T1|Name=KYF_001294-T1|organism=Aspergillus niger KYF3|type=CDS|length=1794bp|location=Sequence derived from alignment at ch1:3416605..3417556- (Aspergillus niger KYF3)
ACACATTGTAAAGAAGAACGACCAACGGCTCGTTCACTGGTGCCTGGAAC
AAGATGCCGACCCCACCTTCGGCTGCCCGAATGCCCAGTCATTCAATGAC
CTTGAGAAGCCTGATCAGTCTCCTACGAAGGGCTCAGGGGCAGTCCTTGG
CATGGCATCCCGTCGAAGTAGCCCAGAGATTGTTGACCTCCTTCTTGATC
ATGGAGCCAACATCCACAACAGTAATGTCCTACATTATGCTGCATGTAGG
AGAGGCGGACTGGCCATTCCAATGATGGAGCACCTGATACAACGTGGGGC
CGACGTAAATGAATTCGGCTATCCCGCATTCCTACATTTCGGTGGCACTC
CCCTTCATGCGGCCAGCTACCAAGGGAATCTACTGGCCGTGAAGTGGCTC
CTAAAGCATGGCGCAAACCCCGGCGTGGAAGACGCGCAAGGTAGTAAGCC
GCTTGATCTAGCAGCTTTGGAGGAGGAAGACGAAATATGTGATGTTCTCT
ATGAATTGTCGCCATTGGACGACTTTGGGAAGGGTGAGAATAGTAGCTCA
GGCCAGCCGAAAGCGAACAGTTCCAGAGCATGAATGTCACTTCCATTTCA
GGTAGTAGAGGAGACTAATCAGGCCTTTCTGGAGAGCTGCCGTCACGGTG
ACTTGGCCCAAGTCAAGAAACATCAGAAGGCTAAGACTCTAGACCAAGAG
GTTCTGACCTTGGGCTTGAGGAAAGCTGCCCAGGGCGATCATATCGAAAC
TATGCGCTATCTACTAAATGCAGGCGCCAAACCCCAGTCTCCCACTGTCG
TGGATGAAGTACACTCGGCTGAGGCAGTCAAGGCTTTGCTAGACAACGGT
CTTACTTTTGAGACTCAGTTACACCCTCTAGGTACAGTGCCTCTTGTACA
CATTGTAAAGAAGAACGACCAACGGCTCGTTCACTGGTGCCTGGAACAAG
ATGCCGACCCCACCTTCGGCTGCCCGAATGCCCAGTCATTCAATGACCTT
GAGAAGCCTGATCAGTCTCCTACGAAGGGCTCAGGGGCAGTCCTTGGCAT
GGCATCCCGTCGAAGTAGCCCAGAGATTGTTGACCTCCTTCTTGATCATG
GAGCCAACATCCACAACAGTAATGTCCTACATTATGCTGCATGTAGGAGA
GGCGGACTGGCCATTCCAATGATGGAGCACCTGATACAACGTGGGGCCGA
CGTAAATGAATTCGGCTATCCCGCATTCCTACATTTCGGTGGCACTCCCC
TTCATGCGGCCAGCTACCAAGGGAATCTACTGGCCGTGAAGTGGCTCCTA
AAGCATGGCGCAAACCCCGGCGTGGAAGACGCGCAAGGTAGTAAGCCGCT
TGATCTAGCAGCTTTGGAGGAGGAAGACGAAATATGTGATGTTCTCTATG
AATTGTCGCCATTGGACGACTTTGGGAAGGGTGAGAATAGTAGCTCAGGC
CAGCCGAAAGCGAACAGTTCCAGAGCATGAATGTCACTTCCATTTCAGGT
AGTAGAGGAGACTAATCAGGCCTTTCTGGAGAGCTGCCGTCACGGTGACT
TGGCCCAAGTCAAGAAACATCAGAAGGCTAAGACTCTAGACCAAGAGGTT
CTGACCTTGGGCTTGAGGAAAGCTGCCCAGGGCGATCATATCGAAACTAT
GCGCTATCTACTAAATGCAGGCGCCAAACCCCAGTCTCCCACTGTCGTGG
ATGAAGTACACTCGGCTGAGGCAGTCAAGGCTTTGCTAGACAACGGTCTT
ACTTTTGAGACTCAGTTACACCCTCTAGGTACAGTGCCTCTTGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3416605..3417556 - |
|
