|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3440461..3442317- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001303-T1 ID=KYF_001303-T1|Name=KYF_001303-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1857bp|location=Sequence derived from alignment at ch1:3440461..3442317- (Aspergillus niger KYF3)
ATGAACGTGCTCGAACTCGACCTGGCGGGCTCATTCCACCAGTCCAAACC
AGCCCGTCGTGTCGGCCTGGCATGTGCGCCCTGTCGCAAAAAACACCTCC
GCTGCGACGCGAGAACCCCCGTATGTGCCCGCTGCATCGCTGACAATAAG
CAATGCGTCTATGAGAAGTCGCGTCGAGGCGGACGCCGTCGCAAGCCGTC
AGAGTCAGCATCAGGATTGGGATCCGGTGGGAATTCAACAGCATCGTCTG
CACTTCTGACTCCGGGTCTCCCTGCCGATCAATTGTGGGTCCCGTCATCG
TCACCGGAGTCTGTCATGGTGCCAGCAGTTCAGGCACAGGCCAGGAGCAC
AACAAGTGGCTCGATGACACATCCTGCACTCTCTGCAACGGCTGAAAATG
ATGCCTTAAGAACAGATCGGCTGTATAACCTTTACTACACTTTTTTCCAT
CCCGCGCATCCATGCGTTTTACCATGGCGGTTCCTCAGCCAGCGCCTCGA
GACAGAGCGCGAGACAATACAACCGCTCCTTTATGTGATGCAGTATATCG
GGGCACACTATGCAGATGACGTTGATGCGTCGCCACTGGCGACAATCTCC
GAGTCACGATTAGCTCCTATACGCAGCAAACAAGCCGCTGCGACCGGGTT
CGACGTGCAGGCCATGATCCTCTACTCGATTGCAGTGTACTGGTGCGATG
AAATAGACCGGGGTGTTAATTTACTCAAAGAAGCCATTCAAATGGCCTTG
AATATACAAATGAACAAGAAAGATTATGCTACACATTTTGGCCAGAATGA
CCCGATGCTAGAAGAAAGCTGGCGTCGCACCTGGTGGCTTGTATACATCA
CGGATGCCCACGTGGCTGGTAGCACCCATGTCTACCCATTTCGCACGAGC
AATATAGACATGAGTGTCGATCTTCCATGCGAAGAGGAAGACTATGAAGC
TGGGGTAATTTGCCCTCCGACAACCCTCGAAGTATACGACATCCGGGAAT
TTCTCCCAGAAGCAGACCGACCCAGCTTCTCCTCTTACGCAGAGCTCATT
GGCTTAACCCGTTCAATAGACAAAGCCTTAGCATCCGACTGGTCCAAAAA
CGCCGCCCTGGTCCACACAATTTGCGAGAATGCCGACATCAGCGTCGCGG
CCTGGCACTCGCTACTTCCACCCTGCAAGCGAGACCCGCTACGCAGCGAC
GGCACCGTCGATGAAATCATGTTCAAATCCAAGTTCATCCTCCACGCATA
CGCTATAGAGATACATCGTCCATTATCAACCTTGGCGTACAGTTCCGTCG
AGTCGACCTGCAAATGCGCACCCCCGGTACCAGCTGAAGACGCCCCAGGA
TCAGACACCACTCAAATCCAGCTCCACACACTCAAATGTTTGCACGCGAT
AGACCAACTCGGGCGGCTCATGATACTCCCCGCTAATATCCACGCTCATA
CCCCATTCATCATCTGCATGATTGCCAACGCCACCATTGCCCATTTAGCC
GCCTGTCGGTACGTATTTGCCGGGCCGGACCTCCAGCTTGGTCGTGAGAG
AATCCGTCTCAGTATGGGTACTTTAAAGAGGCTGAGTGAACATTGGGGGC
AGGGAAAGAGAATTTATCGAGAGATGGGGATTGTTGCGAGGGAGATCCTG
TCCCTTGCGGATCGGGAGAAGGGTAGTCATGATCGAGTTGGATTCTCTAC
GAAAGGTACATTATCAGGCATGCCGAATACACCTGCTGCACTGGAGTTTT
CGTCATTCGACATGCATAATATGAACGTGGCAGAGTTCAATTTCTGTGGG
TATTTCGATGGGGCTATTGGTGAGGTAGTTGAGCCTGCTTCATTTCTGGT
TGTCTGA back to topCoding sequence (CDS) from alignment at ch1:3440461..3442317- >KYF_001303-T1 ID=KYF_001303-T1|Name=KYF_001303-T1|organism=Aspergillus niger KYF3|type=CDS|length=1857bp|location=Sequence derived from alignment at ch1:3440461..3442317- (Aspergillus niger KYF3)
ATGAACGTGCTCGAACTCGACCTGGCGGGCTCATTCCACCAGTCCAAACC
AGCCCGTCGTGTCGGCCTGGCATGTGCGCCCTGTCGCAAAAAACACCTCC
GCTGCGACGCGAGAACCCCCGTATGTGCCCGCTGCATCGCTGACAATAAG
CAATGCGTCTATGAGAAGTCGCGTCGAGGCGGACGCCGTCGCAAGCCGTC
AGAGTCAGCATCAGGATTGGGATCCGGTGGGAATTCAACAGCATCGTCTG
CACTTCTGACTCCGGGTCTCCCTGCCGATCAATTGTGGGTCCCGTCATCG
TCACCGGAGTCTGTCATGGTGCCAGCAGTTCAGGCACAGGCCAGGAGCAC
AACAAGTGGCTCGATGACACATCCTGCACTCTCTGCAACGGCTGAAAATG
ATGCCTTAAGAACAGATCGGCTGTATAACCTTTACTACACTTTTTTCCAT
CCCGCGCATCCATGCGTTTTACCATGGCGGTTCCTCAGCCAGCGCCTCGA
GACAGAGCGCGAGACAATACAACCGCTCCTTTATGTGATGCAGTATATCG
GGGCACACTATGCAGATGACGTTGATGCGTCGCCACTGGCGACAATCTCC
GAGTCACGATTAGCTCCTATACGCAGCAAACAAGCCGCTGCGACCGGGTT
CGACGTGCAGGCCATGATCCTCTACTCGATTGCAGTGTACTGGTGCGATG
AAATAGACCGGGGTGTTAATTTACTCAAAGAAGCCATTCAAATGGCCTTG
AATATACAAATGAACAAGAAAGATTATGCTACACATTTTGGCCAGAATGA
CCCGATGCTAGAAGAAAGCTGGCGTCGCACCTGGTGGCTTGTATACATCA
CGGATGCCCACGTGGCTGGTAGCACCCATGTCTACCCATTTCGCACGAGC
AATATAGACATGAGTGTCGATCTTCCATGCGAAGAGGAAGACTATGAAGC
TGGGGTAATTTGCCCTCCGACAACCCTCGAAGTATACGACATCCGGGAAT
TTCTCCCAGAAGCAGACCGACCCAGCTTCTCCTCTTACGCAGAGCTCATT
GGCTTAACCCGTTCAATAGACAAAGCCTTAGCATCCGACTGGTCCAAAAA
CGCCGCCCTGGTCCACACAATTTGCGAGAATGCCGACATCAGCGTCGCGG
CCTGGCACTCGCTACTTCCACCCTGCAAGCGAGACCCGCTACGCAGCGAC
GGCACCGTCGATGAAATCATGTTCAAATCCAAGTTCATCCTCCACGCATA
CGCTATAGAGATACATCGTCCATTATCAACCTTGGCGTACAGTTCCGTCG
AGTCGACCTGCAAATGCGCACCCCCGGTACCAGCTGAAGACGCCCCAGGA
TCAGACACCACTCAAATCCAGCTCCACACACTCAAATGTTTGCACGCGAT
AGACCAACTCGGGCGGCTCATGATACTCCCCGCTAATATCCACGCTCATA
CCCCATTCATCATCTGCATGATTGCCAACGCCACCATTGCCCATTTAGCC
GCCTGTCGGTACGTATTTGCCGGGCCGGACCTCCAGCTTGGTCGTGAGAG
AATCCGTCTCAGTATGGGTACTTTAAAGAGGCTGAGTGAACATTGGGGGC
AGGGAAAGAGAATTTATCGAGAGATGGGGATTGTTGCGAGGGAGATCCTG
TCCCTTGCGGATCGGGAGAAGGGTAGTCATGATCGAGTTGGATTCTCTAC
GAAAGGTACATTATCAGGCATGCCGAATACACCTGCTGCACTGGAGTTTT
CGTCATTCGACATGCATAATATGAACGTGGCAGAGTTCAATTTCTGTGGG
TATTTCGATGGGGCTATTGGTGAGGTAGTTGAGCCTGCTTCATTTCTGGT
TGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3440461..3442317 - |
|
