You are here

Home

KYF_001504-T1, KYF_001504-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001504-T1
Unique NameKYF_001504-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:617806..618850-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001504-T1 ID=KYF_001504-T1|Name=KYF_001504-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1045bp|location=Sequence derived from alignment at ch2:617806..618850- (Aspergillus niger KYF3)
ATGCCTTCAGAACAACTCTCCATTTTCCCTTCCACATCAATGTCTTCCAC
CCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAACCCTCGTGAGAA
CAAACACTTCCACAGCAACTCCCAATGACTCCTACCACTTCGACTTCGGG
CCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCCGCCTTCGCCGG
CGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCGCAAGATCGCCA
ATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTACATTCCTCCTG
GGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCGAACATGATCGT
CGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCTCGCGGGCATGT
GGTACGTACATACCTCCCCCCCAACGGCAATCCAACCTAGCAACTCAAGT
CCCCCATCAATGTCCATGTCCACTAACCAATCAAACCAGGGAAATGGCCG
CCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGG
ATCTCCCTATCCATAGTCTTCACTCCGGGCGGATTCGACATCCAGGGCGC
CTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCG
GATTATACCTAATGGTATTCTCATCTTCACATAACGGCTACCACGAAGTA
CTAATGATAATCCAGGGCTGGTTTATCTTCACCTTCCTCCTCTGGCTCTG
CACGCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCAGCCGTTGACA
TCGCCCTCCTCCTCCTAGCAGTCGGGTATATTCACCGCACTGCGCCGGAG
GTGCCCAACGCGAAGATCATTAAAGCTGGTGGGTTGTTTGCGCTGCTGGG
CGCCTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTA
ATAGTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGG
AGGGAGTCGAGACGGAAGGAGGGGGAGAGTGGGGAGAGTGTTTGA
back to top

Coding sequence (CDS) from alignment at ch2:617806..618850-

>KYF_001504-T1 ID=KYF_001504-T1|Name=KYF_001504-T1|organism=Aspergillus niger KYF3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch2:617806..618850- (Aspergillus niger KYF3)
GGCTGGTTTATCTTCACCTTCCTCCTCTGGCTCTGCACGCTCAAATCGAC
CTACGTCTTCTGCGCCCTCTTCGCAGCCGTTGACATCGCCCTCCTCCTCC
TAGCAGTCGGGTATATTCACCGCACTGCGCCGGAGGTGCCCAACGCGAAG
ATCATTAAAGCTGGTGGGTTGTTTGCGCTGCTGGGCGCCTTCATGGCTTG
GTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAGTTTCTTTCTTG
TTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGGAGTCGAGACGG
AAGGAGGGGGAGAGTGGGGAGAGTGTTTGAGGAAATGGCCGCCGGGAACA
CCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATCTCCCTA
TCCATAGTCTTCACTCCGGGCGGATTCGACATCCAGGGCGCCTACAAAGC
AGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGATTATACC
TAATGATGCCTTCAGAACAACTCTCCATTTTCCCTTCCACATCAATGTCT
TCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAACCCTCGT
GAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACTTCGACT
TCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCCGCCTTC
GCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCGCAAGAT
CGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTACATTCC
TCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCGAACATG
ATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCTCGCGGG
CATGTGGGCTGGTTTATCTTCACCTTCCTCCTCTGGCTCTGCACGCTCAA
ATCGACCTACGTCTTCTGCGCCCTCTTCGCAGCCGTTGACATCGCCCTCC
TCCTCCTAGCAGTCGGGTATATTCACCGCACTGCGCCGGAGGTGCCCAAC
GCGAAGATCATTAAAGCTGGTGGGTTGTTTGCGCTGCTGGGCGCCTTCAT
GGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAGTTTCT
TTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGGAGTCG
AGACGGAAGGAGGGGGAGAGTGGGGAGAGTGTTTGAGGAAATGGCCGCCG
GGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATC
TCCCTATCCATAGTCTTCACTCCGGGCGGATTCGACATCCAGGGCGCCTA
CAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGAT
TATACCTAATGATGCCTTCAGAACAACTCTCCATTTTCCCTTCCACATCA
ATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAAC
CCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACT
TCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCC
GCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCG
CAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTA
CATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCG
AACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCT
CGCGGGCATGTGGGCTGGTTTATCTTCACCTTCCTCCTCTGGCTCTGCAC
GCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCAGCCGTTGACATCG
CCCTCCTCCTCCTAGCAGTCGGGTATATTCACCGCACTGCGCCGGAGGTG
CCCAACGCGAAGATCATTAAAGCTGGTGGGTTGTTTGCGCTGCTGGGCGC
CTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATA
GTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGG
GAGTCGAGACGGAAGGAGGGGGAGAGTGGGGAGAGTGTTTGAGGAAATGG
CCGCCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTC
TGGATCTCCCTATCCATAGTCTTCACTCCGGGCGGATTCGACATCCAGGG
CGCCTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCAT
TCGGATTATACCTAATGATGCCTTCAGAACAACTCTCCATTTTCCCTTCC
ACATCAATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGA
ACCAACCCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCT
ACCACTTCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATC
TATCCCGCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAA
GCGTCGCAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGC
TCACTACATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCC
ACACCGAACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCA
GCTTCTCGCGGGCATGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001504KYF_001504Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001504-T1KYF_001504-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001504-T1.cdsKYF_001504-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001504-T1.exon3KYF_001504-T1.exon3Aspergillus niger KYF3exon
KYF_001504-T1.exon2KYF_001504-T1.exon2Aspergillus niger KYF3exon
KYF_001504-T1.exon1KYF_001504-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:617806..618850 -
Powered by Drupal