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KYF_001583-T1, KYF_001583-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001583-T1
Unique NameKYF_001583-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:863296..864035+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001583-T1 ID=KYF_001583-T1|Name=KYF_001583-T1|organism=Aspergillus niger KYF3|type=mRNA|length=740bp|location=Sequence derived from alignment at ch2:863296..864035+ (Aspergillus niger KYF3)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCCGAATTTCGATGCC
TTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAACGGCGTGGAGATG
GTACCTTTTGCTTGAGAGCAGATTCTAACAGGCATTTTACTTTATAGGAT
CCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACCTCC
CGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCGTTG
AATACAGTTGATGATCTATATTTTCTACGGCTATGGTGGTGGCGCTGGTT
GGACCGAATCGAATTATTTCCCCTCGAAGAGAAAATCCCGCGAGAAGAAT
GGCAAAGAATGAGAATGTGCGCACGCATCGGAAATCGACAACATCCACGA
TTCTATAAGCGAAAAGGACGAATCTCCCAAACCCAACACGACGCACGCAG
GAATCGAAGAGAAGGAATAAGGAAACCAAGCAGTATCGCGGGTTATTTTT
CATCTCCACGGGGAAATATCGCATTCAGTCCAGCCAGCCAGCCAACCAAC
CAGTCGCTCCGTCATGTCCAAACCAAACCCATATATCGCACACATCAAGC
TAACTAAACTCCTCTTCGTCGCAAACAGTCAAGGTCGACGACATCCTCTG
CCTGCTCGAGTCCGAACGCGAGGCCCGCCGTCTCCGTTAA
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Coding sequence (CDS) from alignment at ch2:863296..864035+

>KYF_001583-T1 ID=KYF_001583-T1|Name=KYF_001583-T1|organism=Aspergillus niger KYF3|type=CDS|length=621bp|location=Sequence derived from alignment at ch2:863296..864035+ (Aspergillus niger KYF3)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCA
TGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGTCAAG
GTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGCCGTCT
CCGTTAAATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCC
GTGTCCTCGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGTCCGCGTC
GAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCC
AGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCC
GCCGTCTCCGTTAAATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAG
GTCACCCGTGTCCTCGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGT
CCGCGTCGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCA
AGGGCCCAGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGC
GAGGCCCGCCGTCTCCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS28KYF_001583Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001583-T1.exon1KYF_001583-T1.exon1Aspergillus niger KYF3exon
KYF_001583-T1.exon2KYF_001583-T1.exon2Aspergillus niger KYF3exon
KYF_001583-T1.exon3KYF_001583-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001583-T1.cdsKYF_001583-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001583-T1KYF_001583-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR028626
DBxrefInterPro:IPR000289
DBxrefPFAM:PF01200
Product40S ribosomal protein S28
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:863296..864035 +
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