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KYF_001613-T1, KYF_001613-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001613-T1
Unique NameKYF_001613-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:947965..950160+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001613-T1 ID=KYF_001613-T1|Name=KYF_001613-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2196bp|location=Sequence derived from alignment at ch2:947965..950160+ (Aspergillus niger KYF3)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCCATTTGAGGTCCAGATGCGCCGG
CGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATC
CGGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGC
TAAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCAT
GAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCT
GTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTA
CAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTG
GAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCC
CTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCC
GGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACA
CAGCAGAGACACCTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAA
TGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAG
CGTTTTTCGTGTGGGATTCCCTCCTTTGTATTCTGAGAAGCATTGCGAAG
GTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTC
AGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGT
ATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCT
CGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACA
CAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATC
AAGCTACAGATGGGGCTTTTTCTTTCGATGAGCTTTTCGACGATATGAGC
AGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGA
TTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA
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Coding sequence (CDS) from alignment at ch2:947965..950160+

>KYF_001613-T1 ID=KYF_001613-T1|Name=KYF_001613-T1|organism=Aspergillus niger KYF3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch2:947965..950160+ (Aspergillus niger KYF3)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCCATTTGAGGTCCAGATGCGCCGG
CGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATC
CGGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGC
TAAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCAT
GAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCT
GTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTA
CAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTG
GAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCC
CTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCC
GGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACA
CAGCAGAGACACCTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAA
TGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAG
CGTTTTTCGTGTGGGATTCCCTCCTTTGTATTCTGAGAAGCATTGCGAAG
GTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTC
AGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGT
ATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCT
CGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACA
CAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATC
AAGCTACAGATGGGGCTTTTTCTTTCGATGAGCTTTTCGACGATATGAGC
AGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGA
TTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VRTR1KYF_001613Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001613-T1.exon1KYF_001613-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001613-T1.cdsKYF_001613-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001613-T1KYF_001613-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
ProductTranscription factor vrtR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:947965..950160 +
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