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KYF_001649-T1, KYF_001649-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001649-T1
Unique NameKYF_001649-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1047338..1048516-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001649-T1 ID=KYF_001649-T1|Name=KYF_001649-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1179bp|location=Sequence derived from alignment at ch2:1047338..1048516- (Aspergillus niger KYF3)
ATGAACGCACCAGACCGGTAGGTGGAACGTTCTTCTTACATCTACGCAGT
CTATCTTGTAGCATGCTTTATTCCCACTTGGTTTCCGCGCCCCTTCCTCT
CCTCCCCCACCTTTTGGCTTGTTCTAGGTTCGGGAGCTGTTCGCTGGTGG
GAATGGTGTGACTGAAGTCTCAATGCGGACGGTGCCATTAACCGGGCACA
TGCTCTTGCCTTCCCCCCTCCATTCACTGCCCCAGAGTGCCGAACTATGT
TATGGACTCTACTCCTATCCCTCTTCCTCTCCCTCAGTTCATTTCAATGT
TTATGCCCCTTGTCCAGATCTCTCATTGAATGGATTGACTTCGTACTTTG
CGTTGTCTTCACCCCCTAGCATTCCTGTCATATTGTGAATCTTTCTCGAA
CACAACGATTTTAAGAATGGAATCCATCATGCCTGCAGAAATGGTGTATG
CGCGCCTGAAGAATGGCAGTGGCGGATCTCGCGTTCGCTGCCAGTCTACC
GTCAACGTTTCTCATGACCAGCAGCCGAGGTCCGCTTCGGGTTTTCTTTG
AAGATTCTACTTGCCTTCATTTGTGAAGCTTCTAATACATTCGGTCCACT
GACTCGGTATGAAACCTAGATACGAATCGTTCGTTCTTGCGAATGGCGAG
AATAAAGTCGAGATGGAGATCGATACTCGTATGTCATCCAAACCTCGCAC
CTAAACGGTCTGCGTTCATTTCTGACATGGGCTTCTTGTGCTAGGAATCC
CATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAAAT
TTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCGTA
CAAGGTATGTCGGCGATCGTGATTTATCCTCGTTTCTATTTCCGGGCATT
CTTCATGCTCCCAGTTGCTGCTTTTATCAGAGCTGTGGGGTTAGTTTGCG
TAAGGGTCTGACGTGACTGTCATAGGTTCCCCATCCGCTTGTTCCCAATT
TCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGTA
ATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGGA
GTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAGC
AGCAGAATGGCGTCCAGGATGGTGTTTAG
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Coding sequence (CDS) from alignment at ch2:1047338..1048516-

>KYF_001649-T1 ID=KYF_001649-T1|Name=KYF_001649-T1|organism=Aspergillus niger KYF3|type=CDS|length=1560bp|location=Sequence derived from alignment at ch2:1047338..1048516- (Aspergillus niger KYF3)
GTTCCCCATCCGCTTGTTCCCAATTTCCAGCTTCGAGTTCAGACCGATGG
CGATATCACCCCAAAGGATGCGGTAATTGCAGCCTGCCATGAGCTTGTTC
GGGACCTGGGTATCCTCTCTCGGGAGTTTACTAAGGAATATGAGCTCCGT
AAGATGGTGGGGGCTACCGCCCAGCAGCAGAATGGCGTCCAGGATGGTGT
TTAGGAATCCCATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACAC
GTTGGGAAATTTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCT
TCGCTGCGTACAAGATACGAATCGTTCGTTCTTGCGAATGGCGAGAATAA
AGTCGAGATGGAGATCGATACTCATGAACGCACCAGACCGGTTCCCCATC
CGCTTGTTCCCAATTTCCAGCTTCGAGTTCAGACCGATGGCGATATCACC
CCAAAGGATGCGGTAATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGG
TATCCTCTCTCGGGAGTTTACTAAGGAATATGAGCTCCGTAAGATGGTGG
GGGCTACCGCCCAGCAGCAGAATGGCGTCCAGGATGGTGTTTAGGAATCC
CATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAAAT
TTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCGTA
CAAGATACGAATCGTTCGTTCTTGCGAATGGCGAGAATAAAGTCGAGATG
GAGATCGATACTCATGAACGCACCAGACCGGTTCCCCATCCGCTTGTTCC
CAATTTCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATG
CGGTAATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCT
CGGGAGTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGC
CCAGCAGCAGAATGGCGTCCAGGATGGTGTTTAGGAATCCCATCTTCTGC
CATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAAATTTGATCCGCT
CTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCGTACAAGATACGA
ATCGTTCGTTCTTGCGAATGGCGAGAATAAAGTCGAGATGGAGATCGATA
CTCATGAACGCACCAGACCGGTTCCCCATCCGCTTGTTCCCAATTTCCAG
CTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGTAATTGC
AGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGGAGTTTA
CTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAGCAGCAG
AATGGCGTCCAGGATGGTGTTTAGGAATCCCATCTTCTGCCATCTTCACC
TTCAATAAGGAAGATCACACGTTGGGAAATTTGATCCGCTCTCGCCTCTT
GCAAAGCTCTCATGTTCTCTTCGCTGCGTACAAGATACGAATCGTTCGTT
CTTGCGAATGGCGAGAATAAAGTCGAGATGGAGATCGATACTCATGAACG
CACCAGACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005665RNA polymerase II, core complex
Vocabulary: Biological Process
TermDefinition
GO:0006366transcription by RNA polymerase II
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0001055RNA polymerase II activity
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001649KYF_001649Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001649-T1KYF_001649-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001649-T1.cdsKYF_001649-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001649-T1.exon4KYF_001649-T1.exon4Aspergillus niger KYF3exon
KYF_001649-T1.exon3KYF_001649-T1.exon3Aspergillus niger KYF3exon
KYF_001649-T1.exon2KYF_001649-T1.exon2Aspergillus niger KYF3exon
KYF_001649-T1.exon1KYF_001649-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG0926591L
DBxrefInterPro:IPR037685
DBxrefInterPro:IPR008193
DBxrefInterPro:IPR036603
DBxrefInterPro:IPR009025
DBxrefPFAM:PF13656
DBxrefPFAM:PF01193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1047338..1048516 -
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