You are here

KYF_001750-T1, KYF_001750-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001750-T1
Unique NameKYF_001750-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1418509..1419569+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001750-T1 ID=KYF_001750-T1|Name=KYF_001750-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1061bp|location=Sequence derived from alignment at ch2:1418509..1419569+ (Aspergillus niger KYF3)
ATGGGTTGTTTGGGAGAGAGCTTGCAAGCATCCCATGGTCCCATTCAAGG TAGGAATTCGGCACATTGTTGGTGCTATAATACTAACGCATGTATAGCTA CTAAAGGATAGAGCAGTCTGGGGTGCCTTGGGGATAGCTGTTATGCTAAA CACTGGTAAGCAGGAACATGTCCTTCTGATGCCGTATCTAAACGAGGTGC AGCATGGGCTCTTCAGAGTGAATATCTCTACACTGTCCTCATTGTTAGCT TTGGCGAGAGTATTACAAGCGCAACGAGGATCAGGTCCCTTTACAGGTAA GCTACAAGGAATTCGGTAATTGTACAGACGTTGACCCCATTCTTCACAGC TTTGCCAGCGTCCTCACCGGTTCCATTCTAGGTATCGTAGTATTCAAGGT CAGGCGTCTCAAACCATTCATTGTTGGAGGTACATTGTTGTTCATGGTAG CCTACGGAATCTTGATCTATTACCGCGGAGGGCCCACATCATCCAGTCAT TCGGGGATAATTGGCGGCCAAATCCTTCTGGGTATTGGTAGGTCCAGACG CAACACCTCTAATTGACCGAAACTAACTAGGACCTTCCAGCTGGAGGATT GTTTCCCTACCCTGCGCAGGCCAGCATTCAGGCTGCCACCAAGCATGAGC GTGAGTTATTCCAATACTTTTCTTAGAAGTTATTTCTGACTTTGGAAAGA CCTGGCTGTCGTCACAGGATTATTTCTAGCCTGCTACAATATTGGCACTG CAGTAGGAGGAAGCATTTCTGGCGCGGTCTGGACCCAGATTCTCCCCGGA GAGCTAAACAGTAGACTCGGCAACGCCACATTGGCCACTCAAGCGTATAA GGATCCATTCACATTCAGTGCTACTTACCCAATTGGGACTCCGGATCGCG ATGCCGTGGTGGCTGCCTACAAGCATACACAAAGGCTACTGTGCATTACC GGCATTTGCTTGACCGTGCCGCTGGTTGCATTTTCTCTCTGCACCCGCAA CTTGGTTCTGACGAAAGAGCAAAGTTTCGCAAATGCCGAAGAGGATAGTG CTGAAGCTTGA
back to top

Coding sequence (CDS) from alignment at ch2:1418509..1419569+

>KYF_001750-T1 ID=KYF_001750-T1|Name=KYF_001750-T1|organism=Aspergillus niger KYF3|type=CDS|length=3405bp|location=Sequence derived from alignment at ch2:1418509..1419569+ (Aspergillus niger KYF3)
ATGGGTTCATGGGCTCTTCAGAGTGAATATCTCTACACTGTCCTCATTGT
TAGCTTTGGCGAGAGTATTACAAGCGCAACGAGGATCAGGTCCCTTTACA
GCTTTGCCAGCGTCCTCACCGGTTCCATTCTAGGTATCGTAGTATTCAAG
GTCAGGCGTCTCAAACCATTCATTGTTGGAGGTACATTGTTGTTCATGGT
AGCCTACGGAATCTTGATCTATTACCGCGGAGGGCCCACATCATCCAGTC
ATTCGGGGATAATTGGCGGCCAAATCCTTCTGGGTATTGCTGGAGGATTG
TTTCCCTACCCTGCGCAGGCCAGCATTCAGGCTGCCACCAAGCATGAGCC
CTGCTACAATATTGGCACTGCAGTAGGAGGAAGCATTTCTGGCGCGGTCT
GGACCCAGATTCTCCCCGGAGAGCTAAACAGTAGACTCGGCAACGCCACA
TTGGCCACTCAAGCGTATAAGGATCCATTCACATTCAGTGCTACTTACCC
AATTGGGACTCCGGATCGCGATGCCGTGGTGGCTGCCTACAAGCATACAC
AAAGGCTACTGTGCATTACCGGCATTTGCTTGACCGTGCCGCTGGTTGCA
TTTTCTCTCTGCACCCGCAACTTGGTTCTGACGAAAGAGCAAAGTTTCGC
AAATGCCGAAGAGGATAGTGCTGAAGCTTGAATGGGTTCATGGGCTCTTC
AGAGTGAATATCTCTACACTGTCCTCATTGTTAGCTTTGGCGAGAGTATT
ACAAGCGCAACGAGGATCAGGTCCCTTTACAGCTTTGCCAGCGTCCTCAC
CGGTTCCATTCTAGGTATCGTAGTATTCAAGGTCAGGCGTCTCAAACCAT
TCATTGTTGGAGGTACATTGTTGTTCATGGTAGCCTACGGAATCTTGATC
TATTACCGCGGAGGGCCCACATCATCCAGTCATTCGGGGATAATTGGCGG
CCAAATCCTTCTGGGTATTGCTGGAGGATTGTTTCCCTACCCTGCGCAGG
CCAGCATTCAGGCTGCCACCAAGCATGAGCCCTGCTACAATATTGGCACT
GCAGTAGGAGGAAGCATTTCTGGCGCGGTCTGGACCCAGATTCTCCCCGG
AGAGCTAAACAGTAGACTCGGCAACGCCACATTGGCCACTCAAGCGTATA
AGGATCCATTCACATTCAGTGCTACTTACCCAATTGGGACTCCGGATCGC
GATGCCGTGGTGGCTGCCTACAAGCATACACAAAGGCTACTGTGCATTAC
CGGCATTTGCTTGACCGTGCCGCTGGTTGCATTTTCTCTCTGCACCCGCA
ACTTGGTTCTGACGAAAGAGCAAAGTTTCGCAAATGCCGAAGAGGATAGT
GCTGAAGCTTGAATGGGTTCATGGGCTCTTCAGAGTGAATATCTCTACAC
TGTCCTCATTGTTAGCTTTGGCGAGAGTATTACAAGCGCAACGAGGATCA
GGTCCCTTTACAGCTTTGCCAGCGTCCTCACCGGTTCCATTCTAGGTATC
GTAGTATTCAAGGTCAGGCGTCTCAAACCATTCATTGTTGGAGGTACATT
GTTGTTCATGGTAGCCTACGGAATCTTGATCTATTACCGCGGAGGGCCCA
CATCATCCAGTCATTCGGGGATAATTGGCGGCCAAATCCTTCTGGGTATT
GCTGGAGGATTGTTTCCCTACCCTGCGCAGGCCAGCATTCAGGCTGCCAC
CAAGCATGAGCCCTGCTACAATATTGGCACTGCAGTAGGAGGAAGCATTT
CTGGCGCGGTCTGGACCCAGATTCTCCCCGGAGAGCTAAACAGTAGACTC
GGCAACGCCACATTGGCCACTCAAGCGTATAAGGATCCATTCACATTCAG
TGCTACTTACCCAATTGGGACTCCGGATCGCGATGCCGTGGTGGCTGCCT
ACAAGCATACACAAAGGCTACTGTGCATTACCGGCATTTGCTTGACCGTG
CCGCTGGTTGCATTTTCTCTCTGCACCCGCAACTTGGTTCTGACGAAAGA
GCAAAGTTTCGCAAATGCCGAAGAGGATAGTGCTGAAGCTTGAATGGGTT
CATGGGCTCTTCAGAGTGAATATCTCTACACTGTCCTCATTGTTAGCTTT
GGCGAGAGTATTACAAGCGCAACGAGGATCAGGTCCCTTTACAGCTTTGC
CAGCGTCCTCACCGGTTCCATTCTAGGTATCGTAGTATTCAAGGTCAGGC
GTCTCAAACCATTCATTGTTGGAGGTACATTGTTGTTCATGGTAGCCTAC
GGAATCTTGATCTATTACCGCGGAGGGCCCACATCATCCAGTCATTCGGG
GATAATTGGCGGCCAAATCCTTCTGGGTATTGCTGGAGGATTGTTTCCCT
ACCCTGCGCAGGCCAGCATTCAGGCTGCCACCAAGCATGAGCCCTGCTAC
AATATTGGCACTGCAGTAGGAGGAAGCATTTCTGGCGCGGTCTGGACCCA
GATTCTCCCCGGAGAGCTAAACAGTAGACTCGGCAACGCCACATTGGCCA
CTCAAGCGTATAAGGATCCATTCACATTCAGTGCTACTTACCCAATTGGG
ACTCCGGATCGCGATGCCGTGGTGGCTGCCTACAAGCATACACAAAGGCT
ACTGTGCATTACCGGCATTTGCTTGACCGTGCCGCTGGTTGCATTTTCTC
TCTGCACCCGCAACTTGGTTCTGACGAAAGAGCAAAGTTTCGCAAATGCC
GAAGAGGATAGTGCTGAAGCTTGAATGGGTTCATGGGCTCTTCAGAGTGA
ATATCTCTACACTGTCCTCATTGTTAGCTTTGGCGAGAGTATTACAAGCG
CAACGAGGATCAGGTCCCTTTACAGCTTTGCCAGCGTCCTCACCGGTTCC
ATTCTAGGTATCGTAGTATTCAAGGTCAGGCGTCTCAAACCATTCATTGT
TGGAGGTACATTGTTGTTCATGGTAGCCTACGGAATCTTGATCTATTACC
GCGGAGGGCCCACATCATCCAGTCATTCGGGGATAATTGGCGGCCAAATC
CTTCTGGGTATTGCTGGAGGATTGTTTCCCTACCCTGCGCAGGCCAGCAT
TCAGGCTGCCACCAAGCATGAGCCCTGCTACAATATTGGCACTGCAGTAG
GAGGAAGCATTTCTGGCGCGGTCTGGACCCAGATTCTCCCCGGAGAGCTA
AACAGTAGACTCGGCAACGCCACATTGGCCACTCAAGCGTATAAGGATCC
ATTCACATTCAGTGCTACTTACCCAATTGGGACTCCGGATCGCGATGCCG
TGGTGGCTGCCTACAAGCATACACAAAGGCTACTGTGCATTACCGGCATT
TGCTTGACCGTGCCGCTGGTTGCATTTTCTCTCTGCACCCGCAACTTGGT
TCTGACGAAAGAGCAAAGTTTCGCAAATGCCGAAGAGGATAGTGCTGAAG
CTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SIT1KYF_001750Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001750-T1KYF_001750-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001750-T1.exon1KYF_001750-T1.exon1Aspergillus niger KYF3exon
KYF_001750-T1.exon2KYF_001750-T1.exon2Aspergillus niger KYF3exon
KYF_001750-T1.exon3KYF_001750-T1.exon3Aspergillus niger KYF3exon
KYF_001750-T1.exon4KYF_001750-T1.exon4Aspergillus niger KYF3exon
KYF_001750-T1.exon5KYF_001750-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001750-T1.cdsKYF_001750-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036259
Productferrioxamine B transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1418509..1419569 +