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KYF_001783-T1, KYF_001783-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001783-T1
Unique NameKYF_001783-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1504597..1505310+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001783-T1 ID=KYF_001783-T1|Name=KYF_001783-T1|organism=Aspergillus niger KYF3|type=mRNA|length=714bp|location=Sequence derived from alignment at ch2:1504597..1505310+ (Aspergillus niger KYF3)
ATGTCAGATCGCGAATTCAGTGGTAAGTTCTTTGCCAGATTACTTCCTGG
TGCGATATTATGATGTCAAGCTAACTTGCGGTTTTCCTAGCGAACGATGA
CTTGTCGCTACCTAAAGGTATGTCGCCTTCCGCCGTGTTGTCGCGTCGCA
TCGACTCCCCCACTTTTGAGGGCAGTGGGACTCGTCGCCCTTTGCTTTGC
CTCCCTCGGACTCAGTATAAAATATAATCAAATATCCATTATATACTAAA
TCGCAAACCATACTCACAGCGACGGTTCAAAAGATCATCACCGAGATCCT
ACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCA
TGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAAGCCAACGAT
ATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCG
CGCCCTCCGTGATCTCGGTTTCAGCGACTACATCCCCGATGTCCTTGCTG
TCGCGGAGGAACACAAAGAGCAGTTGAAGGTATGTGGCTGATACCATTAC
CTCGTTTGTGGCATTGTCCGGCTAACATGGATCGATTACACTAGTCGCGA
GAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCT
TCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACG
CTGCTCCGGAGTGA
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Coding sequence (CDS) from alignment at ch2:1504597..1505310+

>KYF_001783-T1 ID=KYF_001783-T1|Name=KYF_001783-T1|organism=Aspergillus niger KYF3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch2:1504597..1505310+ (Aspergillus niger KYF3)
ATGTCAGATCGCGAATTCAGTGCGAACGATGACTTGTCGCTACCTAAAGC
GACGGTTCAAAAGATCATCACCGAGATCCTACCTCCTTCATCCGGCCAGA
CATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCGTTGAATTC
ATCACTTTGATCTCCTCCGAAGCCAACGATATCAGTGAAAAGGAAGCCAA
GAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGATCTCGGTT
TCAGCGACTACATCCCCGATGTCCTTGCTGTCGCGGAGGAACACAAAGAG
CAGTTGAAGTCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTT
GTCCGAGGAGGAGCTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTA
CTGAGAAGTATCACGCTGCTCCGGAGTGAATGTCAGATCGCGAATTCAGT
GCGAACGATGACTTGTCGCTACCTAAAGCGACGGTTCAAAAGATCATCAC
CGAGATCCTACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCG
ATCTCCTCATGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAA
GCCAACGATATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACA
TGTCGAGCGCGCCCTCCGTGATCTCGGTTTCAGCGACTACATCCCCGATG
TCCTTGCTGTCGCGGAGGAACACAAAGAGCAGTTGAAGTCGCGAGAGAAG
AAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCTTCTACG
GCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACGCTGCTC
CGGAGTGAATGTCAGATCGCGAATTCAGTGCGAACGATGACTTGTCGCTA
CCTAAAGCGACGGTTCAAAAGATCATCACCGAGATCCTACCTCCTTCATC
CGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCG
TTGAATTCATCACTTTGATCTCCTCCGAAGCCAACGATATCAGTGAAAAG
GAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGA
TCTCGGTTTCAGCGACTACATCCCCGATGTCCTTGCTGTCGCGGAGGAAC
ACAAAGAGCAGTTGAAGTCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAG
AGCGGGTTGTCCGAGGAGGAGCTTCTACGGCAGCAACAGGAGTTGTTCCG
CTCAGCTACTGAGAAGTATCACGCTGCTCCGGAGTGAATGTCAGATCGCG
AATTCAGTGCGAACGATGACTTGTCGCTACCTAAAGCGACGGTTCAAAAG
ATCATCACCGAGATCCTACCTCCTTCATCCGGCCAGACATTCTCCAAAGA
TGCTCGCGATCTCCTCATGGAATGCTGCGTTGAATTCATCACTTTGATCT
CCTCCGAAGCCAACGATATCAGTGAAAAGGAAGCCAAGAAGACCATCGCC
TGCGAACATGTCGAGCGCGCCCTCCGTGATCTCGGTTTCAGCGACTACAT
CCCCGATGTCCTTGCTGTCGCGGAGGAACACAAAGAGCAGTTGAAGTCGC
GAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAG
CTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCA
CGCTGCTCCGGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCB2KYF_001783Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001783-T1.exon1KYF_001783-T1.exon1Aspergillus niger KYF3exon
KYF_001783-T1.exon2KYF_001783-T1.exon2Aspergillus niger KYF3exon
KYF_001783-T1.exon3KYF_001783-T1.exon3Aspergillus niger KYF3exon
KYF_001783-T1.exon4KYF_001783-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001783-T1.cdsKYF_001783-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001783-T1KYF_001783-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_2.6
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR003958
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Productnegative cofactor 2 transcription regulator complex subunit ncb2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1504597..1505310 +
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