You are here

KYF_001949-T1, KYF_001949-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001949-T1
Unique NameKYF_001949-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1981779..1982423-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001949-T1 ID=KYF_001949-T1|Name=KYF_001949-T1|organism=Aspergillus niger KYF3|type=mRNA|length=645bp|location=Sequence derived from alignment at ch2:1981779..1982423- (Aspergillus niger KYF3)
ATGCGGACCACGAAAAATGTTCTTGGCGGGGCGGAGCTACTCCTCTCTAG CGCCGCCCAGAAAGAGCCTTCCTATCGACTCTTCCCCGAACATCTTGTCC AACGCTCCGTCTTGTTACCTCCGCAACCCACCGACCGTCAATTGCCTCCC TGCCTGCCCACCATGTTCAAGCCCTCGCAGCCCATGTTGGCGCGCTTGCG CCTGACCACCAAACAGGTCCTTGGTGGCTACTACAAGGGTAACCGGACCG GATCGATGGGTTACTTTGCGAAGAACGGGTCATATGTGATCGATTGGAAA AAAGTCCGCACTTTCGTTGTGCCTGAGAATTTGGATCAGTTTAAGGTGGG ATTATACCTTCTATGATGTTCAATTGACTTTTACCTTGGGATTGAAAGAC TAATACGGATATGTATGATATAGTTGACCCCCTTCGTGACCAAGCGTATG CCTCCCACGAAATCCAAGTACACGAAAGAAGTCGAGAAGCGCGGAAGGAT CGTTACCCTTGAACGGGCTTTCAGCGGAAAGGACTATCTCGATATGTGGG CCTCGGACAACGGTCAGGAAGTTCTGGAACAGGAGCGTCTGGACTCTGAG GCCGCAACGGAACAGTCATCGACTACTCAGCCTGCGCGTCAATAA
back to top

Coding sequence (CDS) from alignment at ch2:1981779..1982423-

>KYF_001949-T1 ID=KYF_001949-T1|Name=KYF_001949-T1|organism=Aspergillus niger KYF3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch2:1981779..1982423- (Aspergillus niger KYF3)
TTGACCCCCTTCGTGACCAAGCGTATGCCTCCCACGAAATCCAAGTACAC
GAAAGAAGTCGAGAAGCGCGGAAGGATCGTTACCCTTGAACGGGCTTTCA
GCGGAAAGGACTATCTCGATATGTGGGCCTCGGACAACGGTCAGGAAGTT
CTGGAACAGGAGCGTCTGGACTCTGAGGCCGCAACGGAACAGTCATCGAC
TACTCAGCCTGCGCGTCAATAAATGCGGACCACGAAAAATGTTCTTGGCG
GGGCGGAGCTACTCCTCTCTAGCGCCGCCCAGAAAGAGCCTTCCTATCGA
CTCTTCCCCGAACATCTTGTCCAACGCTCCGTCTTGTTACCTCCGCAACC
CACCGACCGTCAATTGCCTCCCTGCCTGCCCACCATGTTCAAGCCCTCGC
AGCCCATGTTGGCGCGCTTGCGCCTGACCACCAAACAGGTCCTTGGTGGC
TACTACAAGGGTAACCGGACCGGATCGATGGGTTACTTTGCGAAGAACGG
GTCATATGTGATCGATTGGAAAAAAGTCCGCACTTTCGTTGTGCCTGAGA
ATTTGGATCAGTTTAAGTTGACCCCCTTCGTGACCAAGCGTATGCCTCCC
ACGAAATCCAAGTACACGAAAGAAGTCGAGAAGCGCGGAAGGATCGTTAC
CCTTGAACGGGCTTTCAGCGGAAAGGACTATCTCGATATGTGGGCCTCGG
ACAACGGTCAGGAAGTTCTGGAACAGGAGCGTCTGGACTCTGAGGCCGCA
ACGGAACAGTCATCGACTACTCAGCCTGCGCGTCAATAAATGCGGACCAC
GAAAAATGTTCTTGGCGGGGCGGAGCTACTCCTCTCTAGCGCCGCCCAGA
AAGAGCCTTCCTATCGACTCTTCCCCGAACATCTTGTCCAACGCTCCGTC
TTGTTACCTCCGCAACCCACCGACCGTCAATTGCCTCCCTGCCTGCCCAC
CATGTTCAAGCCCTCGCAGCCCATGTTGGCGCGCTTGCGCCTGACCACCA
AACAGGTCCTTGGTGGCTACTACAAGGGTAACCGGACCGGATCGATGGGT
TACTTTGCGAAGAACGGGTCATATGTGATCGATTGGAAAAAAGTCCGCAC
TTTCGTTGTGCCTGAGAATTTGGATCAGTTTAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001949KYF_001949Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001949-T1KYF_001949-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001949-T1.cdsKYF_001949-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001949-T1.exon2KYF_001949-T1.exon2Aspergillus niger KYF3exon
KYF_001949-T1.exon1KYF_001949-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR019189
DBxrefPFAM:PF09809
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1981779..1982423 -