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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2056286..2057077- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001974-T1 ID=KYF_001974-T1|Name=KYF_001974-T1|organism=Aspergillus niger KYF3|type=mRNA|length=792bp|location=Sequence derived from alignment at ch2:2056286..2057077- (Aspergillus niger KYF3)
ATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGCCTC
TATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACTGCCG
GCGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCCAGC
GGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAACGAGATCGCCTG
GCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCTACG
CCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCCAGC
ATCCCCTCCACCTGGAAGTGGACGTATGTTGCAGCCTAGACCTTCCGACC
GACCGACCGTCAGGACGCATGCTGACTTTTTGGGAATAGATACTCTGGCT
CCGACATCGTGGCCGACGTGGCCTACGACATGTTCCTGGGCTCGACCGCC
GACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTTGCTGCCCTGGG
CGGTGCTGGCCCCATCTCGTCGACCGGCTCCACCATTGCCACCCCGACGA
TCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACGGCGACACCACC
GTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTCTCCGGCGACCT
GAACGACTTCTTCACCTACCTGGTGGACAACGAGGGTGTCTCTGACAGCC
TGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCACCGGTAGCGAC
GCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAGTAA back to topCoding sequence (CDS) from alignment at ch2:2056286..2057077- >KYF_001974-T1 ID=KYF_001974-T1|Name=KYF_001974-T1|organism=Aspergillus niger KYF3|type=CDS|length=1452bp|location=Sequence derived from alignment at ch2:2056286..2057077- (Aspergillus niger KYF3)
ATACTCTGGCTCCGACATCGTGGCCGACGTGGCCTACGACATGTTCCTGG
GCTCGACCGCCGACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTT
GCTGCCCTGGGCGGTGCTGGCCCCATCTCGTCGACCGGCTCCACCATTGC
CACCCCGACGATCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACG
GCGACACCACCGTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTC
TCCGGCGACCTGAACGACTTCTTCACCTACCTGGTGGACAACGAGGGTGT
CTCTGACAGCCTGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCA
CCGGTAGCGACGCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAG
TAAATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGC
CTCTATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACTG
CCGGCGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCC
AGCGGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAACGAGATCGC
CTGGCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCT
ACGCCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCC
AGCATCCCCTCCACCTGGAAGTGGACATACTCTGGCTCCGACATCGTGGC
CGACGTGGCCTACGACATGTTCCTGGGCTCGACCGCCGACGCCTCCTCCG
ATGAGTACGAGATCATGGTCTGGCTTGCTGCCCTGGGCGGTGCTGGCCCC
ATCTCGTCGACCGGCTCCACCATTGCCACCCCGACGATCAACGGCGTGAC
CTGGGACCTGTACACCGGCCCCAACGGCGACACCACCGTCTACAGCTTCG
TCGCCCAGTCGACCACCGAGGACTTCTCCGGCGACCTGAACGACTTCTTC
ACCTACCTGGTGGACAACGAGGGTGTCTCTGACAGCCTGTACCTGACCAC
CCTTGAGGCGGGTACCGAGCCCTTCACCGGTAGCGACGCTGAGCTGAAGG
TGTCCGAGTACTCCGTTTCCATCGAGTAAATGAAGGTTCTCGCTCTTTCC
GCTCTTCTTTCCTTGGCTTCGGCCGCCTCTATCAGCCGCCGTAGCGACTT
CTGCGGCCAATGGGATACCGCCACTGCCGGCGACTTCATCCTGTACAACG
ACCTCTGGGGTGAAGACAACGCCTCCAGCGGCTCCCAGTGCACCGGCGTC
GACTCGGCCAGCGGCAACGAGATCGCCTGGCACACCAGCTGGTCCTGGGA
GGGTGGCAGCAGTGACGTCAAGAGCTACGCCAACGCTGCTCTGCAGTTCA
CTGGTACTCAGCTGAGCTCCATCTCCAGCATCCCCTCCACCTGGAAGTGG
AC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000272 | polysaccharide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008810 | cellulase activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-15) |
| Note | CAZy:GH12 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR002594 |
| DBxref | InterPro:IPR013319 |
| DBxref | PFAM:PF01670 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2056286..2057077 - |
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