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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2059352..2060602+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001976-T1 ID=KYF_001976-T1|Name=KYF_001976-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1251bp|location=Sequence derived from alignment at ch2:2059352..2060602+ (Aspergillus niger KYF3)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTTATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCAAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGACGATGTGGCGGAGACGGTGATGATGAATTTGTTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCGCGGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGCAGTCGGAGCAGATGCAGACGCCGGCTCAAAAGAAG
GTCAAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAG
TCAGCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATC
GGCCCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGC
AGCTCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTG
A back to topCoding sequence (CDS) from alignment at ch2:2059352..2060602+ >KYF_001976-T1 ID=KYF_001976-T1|Name=KYF_001976-T1|organism=Aspergillus niger KYF3|type=CDS|length=1251bp|location=Sequence derived from alignment at ch2:2059352..2060602+ (Aspergillus niger KYF3)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTTATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCAAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGACGATGTGGCGGAGACGGTGATGATGAATTTGTTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCGCGGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGCAGTCGGAGCAGATGCAGACGCCGGCTCAAAAGAAG
GTCAAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAG
TCAGCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATC
GGCCCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGC
AGCTCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTG
A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000049 | tRNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0002098 | tRNA wobble uridine modification |
| GO:0034227 | tRNA thio-modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262IZ6 |
| DBxref | InterPro:IPR000541 |
| DBxref | InterPro:IPR011063 |
| DBxref | InterPro:IPR032442 |
| DBxref | PFAM:PF16503 |
| DBxref | PFAM:PF01171 |
| Product | nucleotidyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2059352..2060602 + |
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