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KYF_001983-T1, KYF_001983-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001983-T1
Unique NameKYF_001983-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2084467..2085437+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001983-T1 ID=KYF_001983-T1|Name=KYF_001983-T1|organism=Aspergillus niger KYF3|type=mRNA|length=971bp|location=Sequence derived from alignment at ch2:2084467..2085437+ (Aspergillus niger KYF3)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGGTGAGAATTCCCC
CCTATATTGCGATCACTTAACATCCCGCCGGGTGCTCGTGTAGTTTGCCA
TAGGATGCCCTTCTTGAAATGAGAAATGGTGTTACTGGGCGGCTCGAAAC
GAACTTTTTCTTTCGCCGGCGGATGGATGTGGCACAAACAGAGAGACTTG
AGAGAAGCCTCATGTGTCTTGCTATACACTCGTTGAACTTTGCTGAGAGT
GCATCAATATAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCC
TTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCT
ATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCT
CCTAAGGGTGCCACCTACGGTATGTACAATTTTCGTCTTTGAGGGATTGG
AACCCAATCTAATTTGTTTGCGACTACAGGCAAGCCCACCAACATGGGTA
TCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGT
GTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAA
CCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGC
ACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTC
CACAAGGTTCGTTATGAATGCCATTGGGGATTATATGTTCTCATTGATTA
CACGTTACTGACCGGGAATGTGTTTCATAGCACCGCGAGGCCCGTGGTCT
TACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACA
ACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAG
AGCTACTGGCGTTACCGTTAA
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Coding sequence (CDS) from alignment at ch2:2084467..2085437+

>KYF_001983-T1 ID=KYF_001983-T1|Name=KYF_001983-T1|organism=Aspergillus niger KYF3|type=CDS|length=2448bp|location=Sequence derived from alignment at ch2:2084467..2085437+ (Aspergillus niger KYF3)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGCTCCGTCAACTGA
ACGCTATCCACCGTGCTTCCCGCCCTTCTCGCCCCGACAAGGCTCGTCGT
CTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAG
ACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGGCAAGC
CCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCT
ACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAA
CTCCTACTGGATCAACCAGGACTCCACCTACAAGTACTTCGAGGTCATCC
TCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGCATCAACTGG
ATCTGCAACGCTGTCCACAAGCACCGCGAGGCCCGTGGTCTTACCGCCAC
CGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACACCC
GCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTACTGG
CGTTACCGTTAAATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAA
GAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGC
TCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCTTCTCGCCCCGAC
AAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCG
TATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCA
CCTACGGCAAGCCCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGC
GCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCT
GCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTACT
TCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCT
CGCATCAACTGGATCTGCAACGCTGTCCACAAGCACCGCGAGGCCCGTGG
TCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCT
ACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACC
CAGAGCTACTGGCGTTACCGTTAAATGGGTGCCCTCAAGTACGTGGAAGA
GATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCC
GTTGCTGGGAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCT
TCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTA
TGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTC
CTAAGGGTGCCACCTACGGCAAGCCCACCAACATGGGTATCAACCAGCTC
AAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCG
CTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCA
CCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATC
CGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCACAAGCACCG
CGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACA
AGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAG
CGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAAATGGGTGCCCTCAA
GTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCC
TGCTGCGTGTCCGTTGCTGGGAGCTCCGTCAACTGAACGCTATCCACCGT
GCTTCCCGCCCTTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGC
CAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTA
AGAGACCCGCTCCTAAGGGTGCCACCTACGGCAAGCCCACCAACATGGGT
ATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCG
TGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCA
ACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAG
CACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGT
CCACAAGCACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCC
GTGGTATCAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGC
CACACCTGGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL15KYF_001983Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001983-T1.exon1KYF_001983-T1.exon1Aspergillus niger KYF3exon
KYF_001983-T1.exon2KYF_001983-T1.exon2Aspergillus niger KYF3exon
KYF_001983-T1.exon3KYF_001983-T1.exon3Aspergillus niger KYF3exon
KYF_001983-T1.exon4KYF_001983-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001983-T1.cdsKYF_001983-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001983-T1KYF_001983-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264L0C
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR020925
DBxrefInterPro:IPR024794
DBxrefInterPro:IPR000439
DBxrefPFAM:PF00827
Product60S ribosomal protein L15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2084467..2085437 +
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