You are here

Home

KYF_002011-T1, KYF_002011-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002011-T1
Unique NameKYF_002011-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2161139..2161723+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002011-T1 ID=KYF_002011-T1|Name=KYF_002011-T1|organism=Aspergillus niger KYF3|type=mRNA|length=585bp|location=Sequence derived from alignment at ch2:2161139..2161723+ (Aspergillus niger KYF3)
ATGGCTAGCGAAAAGAAAGATAAGCTTGAGGGTAAGTCCCCGGACGCGGC
ATTGTCAAATGATGGCTAACATGACCGTTCAGCGCAGATCAAGTCCGTCG
ATATGGTAAGAGGAATTGCTGGAGGTAACCAAGAATTGTGCTTACAACAT
GGCAGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGGTATGGTCAGC
CCTACGGGTCACCTCGAAAAGGAGGGCTAATACAACGGCTAGCAATTGAG
GCAATGGACAAGTACCACATTGAGAAGGTAGGTTCGGTGTCATCTGTTGG
TTGACTATGCTAACGACAGCAGGATATCGCCCAATACATCAAGCGAGAGG
TCAGCATTGCGCACTGTATCCGGACCACCCCTCATTGCTCACAATCTACA
GTTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACT
TTGGCAGCTTCGTCACGCATGGTGAGTGTCATGGCCAGGGCATCAGGGGT
ACGGGCTAACTTTCGAGCAGAGACGAAACACTTCATCTACTTCTACCTCG
GGCACTGCGCCATCCTCCTTTTCAAGACCCAATGA
back to top

Coding sequence (CDS) from alignment at ch2:2161139..2161723+

>KYF_002011-T1 ID=KYF_002011-T1|Name=KYF_002011-T1|organism=Aspergillus niger KYF3|type=CDS|length=1995bp|location=Sequence derived from alignment at ch2:2161139..2161723+ (Aspergillus niger KYF3)
ATGGCTAGCGAAAAGAAAGATAAGCTTGAGGCGCAGATCAAGTCCGTCGA
TATGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCAATTGAGGCAA
TGGACAAGTACCACATTGAGAAGGATATCGCCCAATACATCAAGCGAGAG
TTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACTT
TGGCAGCTTCGTCACGCATGAGACGAAACACTTCATCTACTTCTACCTCG
GGCACTGCGCCATCCTCCTTTTCAAGACCCAATGAATGGCTAGCGAAAAG
AAAGATAAGCTTGAGGCGCAGATCAAGTCCGTCGATATGACGGAGGATAT
GCAGCAGGAGGCTGTTGAAGTTGCAATTGAGGCAATGGACAAGTACCACA
TTGAGAAGGATATCGCCCAATACATCAAGCGAGAGTTCGATTCGCGCAAG
GGTGCGACATGGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCAC
GCATGAGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCC
TCCTTTTCAAGACCCAATGAATGGCTAGCGAAAAGAAAGATAAGCTTGAG
GCGCAGATCAAGTCCGTCGATATGACGGAGGATATGCAGCAGGAGGCTGT
TGAAGTTGCAATTGAGGCAATGGACAAGTACCACATTGAGAAGGATATCG
CCCAATACATCAAGCGAGAGTTCGATTCGCGCAAGGGTGCGACATGGCAC
TGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGAGACGAAACA
CTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCC
AATGAATGGCTAGCGAAAAGAAAGATAAGCTTGAGGCGCAGATCAAGTCC
GTCGATATGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCAATTGA
GGCAATGGACAAGTACCACATTGAGAAGGATATCGCCCAATACATCAAGC
GAGAGTTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGG
AACTTTGGCAGCTTCGTCACGCATGAGACGAAACACTTCATCTACTTCTA
CCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCCAATGAATGGCTAGCG
AAAAGAAAGATAAGCTTGAGGCGCAGATCAAGTCCGTCGATATGACGGAG
GATATGCAGCAGGAGGCTGTTGAAGTTGCAATTGAGGCAATGGACAAGTA
CCACATTGAGAAGGATATCGCCCAATACATCAAGCGAGAGTTCGATTCGC
GCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTC
GTCACGCATGAGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGC
CATCCTCCTTTTCAAGACCCAATGAATGGCTAGCGAAAAGAAAGATAAGC
TTGAGGCGCAGATCAAGTCCGTCGATATGACGGAGGATATGCAGCAGGAG
GCTGTTGAAGTTGCAATTGAGGCAATGGACAAGTACCACATTGAGAAGGA
TATCGCCCAATACATCAAGCGAGAGTTCGATTCGCGCAAGGGTGCGACAT
GGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGAGACG
AAACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAA
GACCCAATGAATGGCTAGCGAAAAGAAAGATAAGCTTGAGGCGCAGATCA
AGTCCGTCGATATGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCA
ATTGAGGCAATGGACAAGTACCACATTGAGAAGGATATCGCCCAATACAT
CAAGCGAGAGTTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCG
GAAGGAACTTTGGCAGCTTCGTCACGCATGAGACGAAACACTTCATCTAC
TTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCCAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005875microtubule associated complex
GO:0030286dynein complex
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002011KYF_002011Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002011-T1KYF_002011-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002011-T1.exon1KYF_002011-T1.exon1Aspergillus niger KYF3exon
KYF_002011-T1.exon2KYF_002011-T1.exon2Aspergillus niger KYF3exon
KYF_002011-T1.exon3KYF_002011-T1.exon3Aspergillus niger KYF3exon
KYF_002011-T1.exon4KYF_002011-T1.exon4Aspergillus niger KYF3exon
KYF_002011-T1.exon5KYF_002011-T1.exon5Aspergillus niger KYF3exon
KYF_002011-T1.exon6KYF_002011-T1.exon6Aspergillus niger KYF3exon
KYF_002011-T1.exon7KYF_002011-T1.exon7Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002011-T1.cdsKYF_002011-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
DBxrefInterPro:IPR019763
DBxrefInterPro:IPR037177
DBxrefInterPro:IPR001372
DBxrefPFAM:PF01221
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2161139..2161723 +
Powered by Drupal