You are here

Home

KYF_002031-T1, KYF_002031-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002031-T1
Unique NameKYF_002031-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2235245..2237196+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002031-T1 ID=KYF_002031-T1|Name=KYF_002031-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1952bp|location=Sequence derived from alignment at ch2:2235245..2237196+ (Aspergillus niger KYF3)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTAAGTTGCATATCAAACCAGGCAAGCGTGACAGGTATTAACAATAAT
ATTTTGCCAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTT
GAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCG
GTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTC
CCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCA
AACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGA
CTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACC
TTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCA
ACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCC
AATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACC
GCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAA
TGTTGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGA
CCTTTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATG
GTGGCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAA
CCGCATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACG
ATGGCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGC
CTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCT
GTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGA
TGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGT
GCTGGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTT
CTTGGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTG
CACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCA
GACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAG
CTCGAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTC
CCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAG
GACTTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGA
CCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTT
ACATAAACTCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTT
TGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGT
GA
back to top

Coding sequence (CDS) from alignment at ch2:2235245..2237196+

>KYF_002031-T1 ID=KYF_002031-T1|Name=KYF_002031-T1|organism=Aspergillus niger KYF3|type=CDS|length=5526bp|location=Sequence derived from alignment at ch2:2235245..2237196+ (Aspergillus niger KYF3)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGG
ACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAG
CGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGC
TGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCA
ATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTT
GTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCA
GCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTA
TCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGC
CAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGAT
TCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAA
ATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGC
CAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAA
CGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTG
CACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAG
GGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAG
CCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACA
CTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGT
CGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGG
ACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAG
CATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGT
ATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTC
GGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGC
CGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGG
CTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAA
ATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCG
TCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTTTTTGAACAAGTC
AGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAATGGCCAG
CCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTC
TTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCA
TCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCG
TCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACG
CGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGAT
CAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGA
TTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCG
AGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAG
GTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCA
TCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGATGCCA
TGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGCTCC
CGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAACTC
CGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTGCGG
CAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCTCCT
CCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGCACC
CACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTCCGG
TTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCCCGT
CCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGACTCC
TTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTGCCC
CCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCCAGC
TGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCAGCC
GCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGACTG
CGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTTGAT
GATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAA
CTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCC
TCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAG
CTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTC
CCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTC
CGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGAC
CCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCA
GTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGG
CTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAG
GACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATC
GCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGG
AGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCT
CTTGGTGCCAGAAACAAAATGCTCAAGGTTTTTGAACAAGTCAGAGAAGC
CAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAATGGCCAGCCATATCA
TCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTTCGTCCT
CCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCATCGGCCGA
TATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCGTCCTTCCT
CGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACGCGGAGGAT
CCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGATCAGTACGA
GACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGATTTCAAGG
ATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAGGCGGAG
AGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAGGTGCAGAT
TCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATCCCATGT
CGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGATGCCATGTCTAAC
CGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGCTCCCGGAGCTC
CCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAACTCCGGACTCG
ACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTGCGGCAATTGCA
AAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCTCCTCCCTCGAA
CCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGCACCCACCATTT
CGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTCCGGTTTCACCC
TGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCCCGTCCCAAGTC
TTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGACTCCTTCGAGCC
TGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTGCCCCCGAGATT
GATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCCAGCTGGGCCTC
CATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCAGCCGCAGCAGC
CCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGACTGCGATGAAG
CTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTTGATGATGCTCG
CAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTCGGCCA
ACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCCCGGGC
CACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTGGCGGC
TTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCGCCCGA
CGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGATGGGC
TTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCGAACAA
CCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTTTGGCC
TGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTCGCGGC
CGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGACCCCAC
GGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCTGCGGC
TGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGGAGCTGGTC
GAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTTGGTGC
CAGAAACAAAATGCTCAAGGTTTTTGAACAAGTCAGAGAAGCCAAAGCCG
AGGGCAAGCTCGACAACATTGCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043488regulation of mRNA stability
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VTS1KYF_002031Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002031-T1.exon1KYF_002031-T1.exon1Aspergillus niger KYF3exon
KYF_002031-T1.exon2KYF_002031-T1.exon2Aspergillus niger KYF3exon
KYF_002031-T1.exon3KYF_002031-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002031-T1.cdsKYF_002031-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002031-T1KYF_002031-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR037635
DBxrefInterPro:IPR013761
DBxrefInterPro:IPR001660
DBxrefPFAM:PF07647
ProductFlap-structured DNA-binding and RNA-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2235245..2237196 +
Powered by Drupal