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KYF_002036-T1, KYF_002036-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002036-T1
Unique NameKYF_002036-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2250463..2251522+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002036-T1 ID=KYF_002036-T1|Name=KYF_002036-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1060bp|location=Sequence derived from alignment at ch2:2250463..2251522+ (Aspergillus niger KYF3)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTATGATGATCCTCTGAAACCACCGG
TGCCCGTTCCGCATGCTGATGAGTTGTCCAGGTTCGCCGTGCCATCAAGG
GCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAG
GGTAAGTGAAGTTGCTTCCAGAGTCTGCGGCGATGTCAATTGGCTAACAT
TTGCCTTCCGCACAGGTAACGTTGGTTTCATCTTCACCAACGGTGACCTC
AAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCG
TGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCG
GTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACC
AAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGA
GGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGA
ACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAG
GGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCT
CGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTG
TCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTAC
AAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGAT
TGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCCTCCGCTG
CTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAG
GCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCT
CTTCGACTAA
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Coding sequence (CDS) from alignment at ch2:2250463..2251522+

>KYF_002036-T1 ID=KYF_002036-T1|Name=KYF_002036-T1|organism=Aspergillus niger KYF3|type=CDS|length=2817bp|location=Sequence derived from alignment at ch2:2250463..2251522+ (Aspergillus niger KYF3)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGT
CAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACG
TTGGTTTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATC
CTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGG
CGATGTCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCT
CTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATT
GAAATTACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCC
CTCCGAGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATG
GTATGACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCT
GTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCAT
TAACACCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCG
CTGTCATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCT
GTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTAT
TGCCAACCCTGACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCC
CTGCTGCCGGTGGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAG
GAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAA
GTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATG
AGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAG
ATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGG
TAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACC
CCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATC
TTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCG
TGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGG
TCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAG
GCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCAC
CGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCA
CCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATC
CAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACAT
TGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCA
CCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCAC
TCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGA
GTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTG
ACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGT
GGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGA
GGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAAGTCTGCTACCA
AGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATGAGTACAAGACG
GTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAGATGCACGAGAT
TCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGGTAAGAACACCA
TGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACCCCGAGTACGAG
CGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATCTTCACCAACGG
TGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTC
CCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGT
AACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGT
CCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGC
TCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAAC
ATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTA
CGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTC
AGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCC
CTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAA
CAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGC
CCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCC
TCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGC
CGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCT
TCGGCCTCTTCGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
60SKYF_002036Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002036-T1.exon1KYF_002036-T1.exon1Aspergillus niger KYF3exon
KYF_002036-T1.exon2KYF_002036-T1.exon2Aspergillus niger KYF3exon
KYF_002036-T1.exon3KYF_002036-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002036-T1.cdsKYF_002036-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002036-T1KYF_002036-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264G1I
DBxrefInterPro:IPR040637
DBxrefInterPro:IPR030670
DBxrefInterPro:IPR001790
DBxrefPFAM:PF17777
DBxrefPFAM:PF00466
DBxrefPFAM:PF00428
Product60s acidic ribosomal protein P2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2250463..2251522 +
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