You are here

Home

KYF_002042-T1, KYF_002042-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002042-T1
Unique NameKYF_002042-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2262815..2265074-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002042-T1 ID=KYF_002042-T1|Name=KYF_002042-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2260bp|location=Sequence derived from alignment at ch2:2262815..2265074- (Aspergillus niger KYF3)
ATGAAGGGCGGAAAAGGATCTCGCGGTCGCTCGGGGGGTTCGGATCGTGG
GGGCATCCGCAAGCGGGGTGCTACGACCCGGGTCGACCGAGAAGGTGATC
TGATGATGGATGCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGC
GATTCTGGCCGGTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAA
GGCCATCTCCAGCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGAC
GGGGAAGTGGTCTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAG
GCAGCATCTAACCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGA
GAAAAAACTCAGCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTA
CAAAGGTATGTGCAACACCAGAACTGGCGGTCACCGACATCAATTATCAG
CTTCGTCCTCTCCGATGTGCTCTCGTTTGCAGGGGTGGTGCGTTCAGAAC
GACGATCGGCACTTTCTTAGTCTCTCCTGGCGTTTGTTCTTTTGGATGAA
TGGCGCGGCTCGCAAGGTCCCTTATGCCTTACTAACGTTCATTAGTCGCG
GGTTGAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGGAAA
GGATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACC
GAAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTC
TGCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGA
AAATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTACTC
GATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATCTT
TGGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTT
GGGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGT
GTCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCACT
AGCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGAAT
TCAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATCTC
GAGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTCAA
GGATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCG
AAGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCT
GTGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTTGT
TAGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAACA
GTGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGGCT
CCCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAGAA
AAGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAGGG
TATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCG
ACTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTG
CTACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTG
TTGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATGGG
GCCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCCGG
TGGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAG
CCTATGGTGGACACGAGGCATGGATTCCTGAGGTTCCACCAGCCGTACCC
CAAGCTGCACCTCCAGCTGCACCAGCACCAGCACCCGCAGCCCCTGCAGC
CCCTGCGGCACTACCAGTAGCCATTCCGGGTGCTCCCGAAGGCTACGGCA
TGCCAGCGCCTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTA
CTTCAGATGAGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGATGGC
TTTGTCTGGAAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTGAGG
AACTTAAGGTAAGTTCGAAGTGTATTCTCCGTCTACGATCATGCGCTAAC
AAGCTTTTGCAGGCGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGC
AGCAGTGTAG
back to top

Coding sequence (CDS) from alignment at ch2:2262815..2265074-

>KYF_002042-T1 ID=KYF_002042-T1|Name=KYF_002042-T1|organism=Aspergillus niger KYF3|type=CDS|length=6048bp|location=Sequence derived from alignment at ch2:2262815..2265074- (Aspergillus niger KYF3)
GCGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAGTC
GCGGGTTGAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGG
AAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACC
ACCGAAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCT
GTCTGCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGG
CGAAAATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTA
CTCGATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAAT
CTTTGGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGG
TTTGGGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAG
AGTGTCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGC
ACTAGCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATG
AATTCAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAAT
CTCGAGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTT
CAAGGATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATG
TCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATT
CCTGTGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTT
TGTTAGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCA
ACAGTGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCG
GCTCCCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAA
GAAAAGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTA
GGGTATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCC
GCGACTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGA
GTGCTACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGG
GTGTTGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAAT
GGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCC
CGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGC
GAGCCTATGGTGGACACGAGGCATGGATTCCTGAGGTTCCACCAGCCGTA
CCCCAAGCTGCACCTCCAGCTGCACCAGCACCAGCACCCGCAGCCCCTGC
AGCCCCTGCGGCACTACCAGTAGCCATTCCGGGTGCTCCCGAAGGCTACG
GCATGCCAGCGCCTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTA
GTACTTCAGATGAGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGAT
GGCTTTGTCTGGAAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTG
AGGAACTTAAGATGAAGGGCGGAAAAGGATCTCGCGGTCGCTCGGGGGGT
TCGGATCGTGGGGGCATCCGCAAGCGGGGTGCTACGACCCGGGTCGACCG
AGAAGGTGATCTGATGATGGATGCTGGCTCTGCACGAAACCGTGGAAAGA
AGGTTCGTGGCGATTCTGGCCGGTCGCAGGCAGCGAACAAAGCCATGGAT
GCGATCCAGAAGGCCATCTCCAGCAACTCAGACACTCAAGCGAACATCCG
ACAAGGAGGACGGGGAAGTGGTCTGGAACAGGTTATTGTTCGTGGCTGGA
AACAAAGCAAGGCAGCATCTAACCGCGACGGCGGTCTCGAATCCCTCATC
GCCTTCCTCGAGAAAAAACTCAGCCCACCCGACTCGAAAGCTGGCACACG
CGCAAGGATTACAAAGGCGCAGGGAACATTGCCTCCGGAGGCTTTTCTAC
CCGCAGCAGTGTAGTCGCGGGTTGAAGGCGACGCTCTTATCGTCTCTATT
CGGCCAGAGTTGTTGGAAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGC
AGGTGCCCCTCTTACCACCGAAAAGTATGACCCGTCTACTGGTGGGTTGC
TGGACCAGCCTATGCTGTCTGCTATGGCACAAAATGGCGGCACATCCTCT
GCTGCCGAGACCAAGGCGAAAATGACGACAATTCTCGGCAAGCGCTACAC
CCAGCAGACAAAATTACTCGATCTTTCGAAATTGGGAACCGATCCGGATC
TCTTGGCTATGGGAATCTTTGGCAGCACATCCACCGAGTCGAAATTCTTC
CCGGCACTGATGAAGGTTTGGGAGCTGAATTTCGACAATGCCACTGCGCG
TCGAGAGGCAGTGGAGAGTGTCAGTCTCGCTCATAATCAGCTTGCCAACA
TCACAGCTGTGACGGCACTAGCATCGACAATTCCAGACCTGAAAAATCTG
GATCTTTCCAACAATGAATTCAAAGATGCGCAATCCTTGATTGGATGGCG
CTGGAAATTCCGCAATCTCGAGTTTCTCGATCTCTCAAACACTCCGTTCA
GCGCCGACCCTACTTTCAAGGATACCATGTTGAAGTGGTATCCCAAGCTC
CGGTTCCTGAACAATGTCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCA
GAAGAAGACGCCGATTCCTGTGCAACCACCGCACTTCCAGGACGACTCTC
AGATCGCAGAGAACTTTGTTAGGGCTTTCTTCGCGGGCTACGACAACGAC
CGAAGCGGCATTCTCAACAGTGTCTACGACAACCACACGACGTTCACTCT
CAATGTGAATACATCGGCTCCCAGGGCCCAACAAACAGAAACAGCGCCCT
GGGATGCGTATATCAAGAAAAGCAGAAACCTTCTCAAGATCAGCCATCTT
CCTGCACGCATGTCTAGGGTATACACCGGTGCGGAGAAAATCCGCGAGTT
GTGGACTAGTCTTCCCGCGACTAGACATCCTGACATTGCGACGCGCCCGG
AAGAATGGCTTATCGAGTGCTACCCTATCCCGGGTCTTCCTGATATTTCC
GGGCAGAGCTCCACGGGTGTTGGTGGACTTCTCATCATGGTGCACGGGAA
GTTCGACGAGATTAATGGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGA
CATTCATCATCGGGCCCGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGT
GATATTCTCTGCTTGCGAGCCTATGGTGGACACGAGGCATGGATTCCTGA
GGTTCCACCAGCCGTACCCCAAGCTGCACCTCCAGCTGCACCAGCACCAG
CACCCGCAGCCCCTGCAGCCCCTGCGGCACTACCAGTAGCCATTCCGGGT
GCTCCCGAAGGCTACGGCATGCCAGCGCCTGGAAAAGCAGACGCACAAGT
CCAGCAAGAGCAGCTAGTACTTCAGATGAGCTCTAATACTCGAATGACCC
TCCAGTACTCTGAGATGGCTTTGTCTGGAAACGGCTGGAATATGGAGGCT
GCACTGAAGAACTTTGAGGAACTTAAGATGAAGGGCGGAAAAGGATCTCG
CGGTCGCTCGGGGGGTTCGGATCGTGGGGGCATCCGCAAGCGGGGTGCTA
CGACCCGGGTCGACCGAGAAGGTGATCTGATGATGGATGCTGGCTCTGCA
CGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTGGCCGGTCGCAGGCAGC
GAACAAAGCCATGGATGCGATCCAGAAGGCCATCTCCAGCAACTCAGACA
CTCAAGCGAACATCCGACAAGGAGGACGGGGAAGTGGTCTGGAACAGGTT
ATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCATCTAACCGCGACGGCGG
TCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAACTCAGCCCACCCGACT
CGAAAGCTGGCACACGCGCAAGGATTACAAAGGCGCAGGGAACATTGCCT
CCGGAGGCTTTTCTACCCGCAGCAGTGTAGTCGCGGGTTGAAGGCGACGC
TCTTATCGTCTCTATTCGGCCAGAGTTGTTGGAAAGGATGCTTCAGCTCA
ATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACCGAAAAGTATGACCCG
TCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTCTGCTATGGCACAAAA
TGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGAAAATGACGACAATTC
TCGGCAAGCGCTACACCCAGCAGACAAAATTACTCGATCTTTCGAAATTG
GGAACCGATCCGGATCTCTTGGCTATGGGAATCTTTGGCAGCACATCCAC
CGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTTGGGAGCTGAATTTCG
ACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGTGTCAGTCTCGCTCAT
AATCAGCTTGCCAACATCACAGCTGTGACGGCACTAGCATCGACAATTCC
AGACCTGAAAAATCTGGATCTTTCCAACAATGAATTCAAAGATGCGCAAT
CCTTGATTGGATGGCGCTGGAAATTCCGCAATCTCGAGTTTCTCGATCTC
TCAAACACTCCGTTCAGCGCCGACCCTACTTTCAAGGATACCATGTTGAA
GTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCGAAGTCCGTACCGCAG
AAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCTGTGCAACCACCGCAC
TTCCAGGACGACTCTCAGATCGCAGAGAACTTTGTTAGGGCTTTCTTCGC
GGGCTACGACAACGACCGAAGCGGCATTCTCAACAGTGTCTACGACAACC
ACACGACGTTCACTCTCAATGTGAATACATCGGCTCCCAGGGCCCAACAA
ACAGAAACAGCGCCCTGGGATGCGTATATCAAGAAAAGCAGAAACCTTCT
CAAGATCAGCCATCTTCCTGCACGCATGTCTAGGGTATACACCGGTGCGG
AGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCGACTAGACATCCTGAC
ATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTGCTACCCTATCCCGGG
TCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTGTTGGTGGACTTCTCA
TCATGGTGCACGGGAAGTTCGACGAGATTAATGGGGCCAAGGTTGAAACT
CGCAGTTTCGATAGGACATTCATCATCGGGCCCGGTGGTGGTATGGGCGG
AATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAGCCTATGGTGGACACG
AGGCATGGATTCCTGAGGTTCCACCAGCCGTACCCCAAGCTGCACCTCCA
GCTGCACCAGCACCAGCACCCGCAGCCCCTGCAGCCCCTGCGGCACTACC
AGTAGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCAGCGCCTGGAA
AAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCAGATGAGCTCT
AATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGTCTGGAAACGG
CTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTTAAGATGAAGG
GCGGAAAAGGATCTCGCGGTCGCTCGGGGGGTTCGGATCGTGGGGGCATC
CGCAAGCGGGGTGCTACGACCCGGGTCGACCGAGAAGGTGATCTGATGAT
GGATGCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTG
GCCGGTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCATC
TCCAGCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGAAG
TGGTCTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCAT
CTAACCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAA
CTCAGCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0051028mRNA transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002042KYF_002042Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002042-T1KYF_002042-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002042-T1.cdsKYF_002042-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002042-T1.exon3KYF_002042-T1.exon3Aspergillus niger KYF3exon
KYF_002042-T1.exon2KYF_002042-T1.exon2Aspergillus niger KYF3exon
KYF_002042-T1.exon1KYF_002042-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09263MNN
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR018222
DBxrefInterPro:IPR002075
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR005637
DBxrefPFAM:PF03943
DBxrefPFAM:PF02136
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2262815..2265074 -
Powered by Drupal