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KYF_002076-T1, KYF_002076-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002076-T1
Unique NameKYF_002076-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2380739..2381483+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002076-T1 ID=KYF_002076-T1|Name=KYF_002076-T1|organism=Aspergillus niger KYF3|type=mRNA|length=745bp|location=Sequence derived from alignment at ch2:2380739..2381483+ (Aspergillus niger KYF3)
ATGCGTAAGTATCATCTCCTTGGTGAAATCGAATAGGCGAACTAATATGT
ATCCCATTGGGCAGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATGT
AAGTTGCATATTCTGAAGATCACTCGGCGCGATTTTTGACGCAGCTGCTA
ACGATCTTTTATAGCCACCTGAGAGTGACTGGTGGTGAGGTCGGTGCCCA
GTCTGCTCTGGCCCCCAAGATTGGTCCTCTCGGTCTGTCCCCCAAGAAGA
TCGGTGAAGATATTGCCAAGAACACTGGTGACTGGGTAAGCACATCGTCC
GGGTCAACCATAGGAGGTTACAGTGCTAACAGCATCTTTTTGGTATTATA
GAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGCCG
CGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCAAG
GAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAGTC
CATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCGCT
CTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCGCT
TTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCCGA
CGACGTCAAGGCTGGCGAGATCGACAGTATGTTAACCACCATACGATATC
TTTCGAGACTTTGCCACTAACTATTTCGCAGTCCCCTCCGAGTAA
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Coding sequence (CDS) from alignment at ch2:2380739..2381483+

>KYF_002076-T1 ID=KYF_002076-T1|Name=KYF_002076-T1|organism=Aspergillus niger KYF3|type=CDS|length=2490bp|location=Sequence derived from alignment at ch2:2380739..2381483+ (Aspergillus niger KYF3)
ATGCCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGT
GACTGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTC
CTCTCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACT
GGTGACTGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCG
TCAGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGG
CCCTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCAC
AGCAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCG
CCACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCG
GTACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGAC
GTCTCCGACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAAT
GCCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGA
CTGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCT
CTCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGG
TGACTGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTC
AGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCC
CTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAG
CAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCC
ACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGT
ACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGT
CTCCGACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAATGC
CTCCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGACT
GGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCT
CGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTG
ACTGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAG
GCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCT
CAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCA
AGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCAC
CGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTAC
CGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCT
CCGACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAATGCCT
CCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGACTGG
TGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCTCG
GTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTGAC
TGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGC
CGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCA
AGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAG
TCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCG
CTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCG
CTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCC
GACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAATGCCTCC
CAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGACTGGTG
GTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCTCGGT
CTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTGACTG
GAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGCCG
CGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCAAG
GAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAGTC
CATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCGCT
CTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCGCT
TTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCCGA
CGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL12KYF_002076Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002076-T1KYF_002076-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002076-T1.exon1KYF_002076-T1.exon1Aspergillus niger KYF3exon
KYF_002076-T1.exon2KYF_002076-T1.exon2Aspergillus niger KYF3exon
KYF_002076-T1.exon3KYF_002076-T1.exon3Aspergillus niger KYF3exon
KYF_002076-T1.exon4KYF_002076-T1.exon4Aspergillus niger KYF3exon
KYF_002076-T1.exon5KYF_002076-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002076-T1.cdsKYF_002076-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
NoteBUSCO:EOG092651LN
DBxrefInterPro:IPR020783
DBxrefInterPro:IPR036796
DBxrefInterPro:IPR036769
DBxrefInterPro:IPR020784
DBxrefInterPro:IPR000911
DBxrefPFAM:PF03946
DBxrefPFAM:PF00298
Product60S ribosomal protein L12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2380739..2381483 +
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