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KYF_002174-T1, KYF_002174-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002174-T1
Unique NameKYF_002174-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2702085..2702669-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002174-T1 ID=KYF_002174-T1|Name=KYF_002174-T1|organism=Aspergillus niger KYF3|type=mRNA|length=585bp|location=Sequence derived from alignment at ch2:2702085..2702669- (Aspergillus niger KYF3)
ATGGTAAGCTTTCCCCTAGTTGATATCATGCATGCACGTATTCTTACCAA
TACCTCCTTACTGCTATAGGCTCCTACTCGCTCGATCAAGAAGCCTGCAA
GTGGGAAAGGCGCTCTGCCCTCGTCTAAGCCCAGCTTTCTCCACGATGAG
TTTCGCACGACGAAGAAGGACAAGCGCTTGATTAAGCACAGCAGCTTTGT
GTCCAGGATAGAAAAGAACTCCCAGAAATCTACAAAGCGCCGGCGTGCCT
CCAAGAAACTTGCTGCTCTGGACTCATTGGCCGATGCGCTTCCGGACGCC
GACGATGCTGCTACCGACCCTAGCAAACAGGTTAATATCATCAAGCAGAA
AACTCTGCAGCATAGGCCAGGTGCTATGAAGCGTCGAGAGAAGCTAGAAC
GGCTGGAGCGCGATCGGTTTGCGAAGAATATGGCGCAGATGTCCAGCATG
CAAGCACCAGCGCCAACCACTACAGACTCCAACAGCAACACGGATGGGGG
CTCGGTTTCCAATCGATGGGCGGCCCTGCGGAACTTCATATCTCAAACTA
TGGAGCAGCAGCCTGCCTTCAAATCAAGCAGCTAG
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Coding sequence (CDS) from alignment at ch2:2702085..2702669-

>KYF_002174-T1 ID=KYF_002174-T1|Name=KYF_002174-T1|organism=Aspergillus niger KYF3|type=CDS|length=1038bp|location=Sequence derived from alignment at ch2:2702085..2702669- (Aspergillus niger KYF3)
GCTCCTACTCGCTCGATCAAGAAGCCTGCAAGTGGGAAAGGCGCTCTGCC
CTCGTCTAAGCCCAGCTTTCTCCACGATGAGTTTCGCACGACGAAGAAGG
ACAAGCGCTTGATTAAGCACAGCAGCTTTGTGTCCAGGATAGAAAAGAAC
TCCCAGAAATCTACAAAGCGCCGGCGTGCCTCCAAGAAACTTGCTGCTCT
GGACTCATTGGCCGATGCGCTTCCGGACGCCGACGATGCTGCTACCGACC
CTAGCAAACAGGTTAATATCATCAAGCAGAAAACTCTGCAGCATAGGCCA
GGTGCTATGAAGCGTCGAGAGAAGCTAGAACGGCTGGAGCGCGATCGGTT
TGCGAAGAATATGGCGCAGATGTCCAGCATGCAAGCACCAGCGCCAACCA
CTACAGACTCCAACAGCAACACGGATGGGGGCTCGGTTTCCAATCGATGG
GCGGCCCTGCGGAACTTCATATCTCAAACTATGGAGCAGCAGCCTGCCTT
CAAATCAAGCAGCTAGATGGCTCCTACTCGCTCGATCAAGAAGCCTGCAA
GTGGGAAAGGCGCTCTGCCCTCGTCTAAGCCCAGCTTTCTCCACGATGAG
TTTCGCACGACGAAGAAGGACAAGCGCTTGATTAAGCACAGCAGCTTTGT
GTCCAGGATAGAAAAGAACTCCCAGAAATCTACAAAGCGCCGGCGTGCCT
CCAAGAAACTTGCTGCTCTGGACTCATTGGCCGATGCGCTTCCGGACGCC
GACGATGCTGCTACCGACCCTAGCAAACAGGTTAATATCATCAAGCAGAA
AACTCTGCAGCATAGGCCAGGTGCTATGAAGCGTCGAGAGAAGCTAGAAC
GGCTGGAGCGCGATCGGTTTGCGAAGAATATGGCGCAGATGTCCAGCATG
CAAGCACCAGCGCCAACCACTACAGACTCCAACAGCAACACGGATGGGGG
CTCGGTTTCCAATCGATGGGCGGCCCTGCGGAACTTCATATCTCAAACTA
TGGAGCAGCAGCCTGCCTTCAAATCAAGCAGCTAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:003068690S preribosome
GO:0030688preribosome, small subunit precursor
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0000462maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002174KYF_002174Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002174-T1KYF_002174-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002174-T1.cdsKYF_002174-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002174-T1.exon2KYF_002174-T1.exon2Aspergillus niger KYF3exon
KYF_002174-T1.exon1KYF_002174-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR028160
DBxrefPFAM:PF15341
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2702085..2702669 -
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