|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2715930..2717280- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002177-T1 ID=KYF_002177-T1|Name=KYF_002177-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1351bp|location=Sequence derived from alignment at ch2:2715930..2717280- (Aspergillus niger KYF3)
ATGTCGGTATGTTTTTGCTTCTTCCAGCATCTCAACCCTCTCAATGGCAA
TGTTAATACTCATGATGCCTCCAGTTCTTCATTGAAAACCCTAATGTCGG
GGACAGATGCTCCCTCGAGGATTCCAGAAGTAAGTGCGCCCGTGACTCAC
TTGCAAAATTCCGTCACCCGTTAACCCTCGGTTTCTCTTTTCCTCTACAG
TTCGTGGATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATC
GCCATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGC
TATTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTG
TCATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGC
GATCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGT
CATGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTC
TCATCAACGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTT
CGCACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCAT
CGCCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTC
TCTCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGT
GAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGA
CGGCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTC
ACCACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACC
GTGGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCC
CAACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCC
AGGGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAG
AAGAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAAT
CGCCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCA
ACGAGGGTATGTTCTACCTTTTTTCCCTCCCCCCAACCCAACACCTTCCA
TCACACCATCCCACTAACATCACCACAACAGGCAACCAAAAGGTTCCTCC
CGAGGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCA
TCCACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTG
CGCACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATA
A back to topCoding sequence (CDS) from alignment at ch2:2715930..2717280- >KYF_002177-T1 ID=KYF_002177-T1|Name=KYF_002177-T1|organism=Aspergillus niger KYF3|type=CDS|length=4548bp|location=Sequence derived from alignment at ch2:2715930..2717280- (Aspergillus niger KYF3)
GCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGGTGTC
AGTATCACCGACGCCTGCATCCACTGGGAAGACACGGAACTTGTTCTGGA
GAACCTGGCACAGGCTGTGCGCACCCGCCGGGAAAAGCTTGCTATCAATG
GCAACGGCAACTCCCAATAATTCGTGGATACAACCCTCTCACACCCCCCA
ACCTCCTTCAGCATGAGATCGCCATGACGGAGAAGTCCCGGCGAACGGTC
ATGGAAGGTCGTGAGGAGGCTATTGCTATCGTCCAGGGCACAGACACCGA
CCGTCGCCGTTTGCTGGTTGTCATCGGTCCCTGCTCCATCCACGACCCTG
AAATGGCCCTCGAATACTGCGATCGCCTCATGAAGATGAAGGAGAAGTAC
AAGGATGAGCTGCTGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGTAC
CACCGTCGGCTGGAAGGGTCTCATCAACGACCCCGACATTGACAACAGCT
TCAAGATCAACAAGGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACCTG
ACCAACAAGGGTATGCCCATCGCCAGTGAGATGCTCGATACCATCTCCCC
CCAGTTTCTGGCCGACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCACCA
CCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCGTT
GGTTTCAAGAACGGTACCGACGGCTCCCTGGATGTCGCTGTCGATGCCAT
TGGCTCCGTCAAGCACCCTCACCACTTCCTGTCCGTCACCAAGCCCGGTG
TCGCTGCTATCGTCGGCACCGTGGGCAACCCCGACTGCTTCGTCATCCTC
CGTGGTGGCAAGAAGGGCCCCAACTACGATGCCCAGAGCATCGCCGAGGC
TAAGGCCAAGCTGACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGACT
GCAGCCACGGTAACTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGGCT
GCTGTTCTGGCCGAGCAAATCGCCGCTGGAGAGACCGCCATCATGGGTGT
CATGATCGAGAGCAACATCAACGAGGTTCTTCATTGAAAACCCTAATGTC
GGGGACAGATGCTCCCTCGAGGATTCCAGAAATGTCGGCAACCAAAAGGT
TCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACG
CCTGCATCCACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAG
GCTGTGCGCACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTC
CCAATAATTCGTGGATACAACCCTCTCACACCCCCCAACCTCCTTCAGCA
TGAGATCGCCATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTG
AGGAGGCTATTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTG
CTGGTTGTCATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGA
ATACTGCGATCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGC
TGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGG
AAGGGTCTCATCAACGACCCCGACATTGACAACAGCTTCAAGATCAACAA
GGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTA
TGCCCATCGCCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCC
GACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGT
CCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACG
GTACCGACGGCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAG
CACCCTCACCACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGT
CGGCACCGTGGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGA
AGGGCCCCAACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTG
ACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAA
CTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCG
AGCAAATCGCCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGC
AACATCAACGAGGTTCTTCATTGAAAACCCTAATGTCGGGGACAGATGCT
CCCTCGAGGATTCCAGAAATGTCGGCAACCAAAAGGTTCCTCCCGAGGGC
AAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCATCCACTG
GGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCC
GCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATAATTCGTG
GATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATCGCCATG
ACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGC
TATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCG
GTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGCGATCGC
CTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCG
CTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCA
ACGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACC
TCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAG
TGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCG
TCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTG
GCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTC
CCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACT
TCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGC
AACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTA
CGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCA
TGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAAC
CACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGC
TGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCAACGAGG
TTCTTCATTGAAAACCCTAATGTCGGGGACAGATGCTCCCTCGAGGATTC
CAGAAATGTCGGCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCGGCCTCA
AGTACGGTGTCAGTATCACCGACGCCTGCATCCACTGGGAAGACACGGAA
CTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCCGCCGGGAAAAGCT
TGCTATCAATGGCAACGGCAACTCCCAATAATTCGTGGATACAACCCTCT
CACACCCCCCAACCTCCTTCAGCATGAGATCGCCATGACGGAGAAGTCCC
GGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGCTATCGTCCAGGGC
ACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCGGTCCCTGCTCCAT
CCACGACCCTGAAATGGCCCTCGAATACTGCGATCGCCTCATGAAGATGA
AGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCGCTCCTACCTCGAG
AAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCAACGACCCCGACAT
TGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACCTCCCGTCAACTTT
TCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAGTGAGATGCTCGAT
ACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCGTCGGCGCCGTTGG
TGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTGT
CCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTCCCTGGATGTCGCT
GTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACTTCCTGTCCGTCAC
CAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGCAACCCCGACTGCT
TCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTACGATGCCCAGAGC
ATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCATGCCTCCCCGCCT
CATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAACCACAAGAACCAGC
CCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGCTGGAGAGACCGCC
ATCATGGGTGTCATGATCGAGAGCAACATCAACGAGGTTCTTCATTGAAA
ACCCTAATGTCGGGGACAGATGCTCCCTCGAGGATTCCAGAAATGTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009073 | aromatic amino acid family biosynthetic process |
| GO:0009058 | biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006219 |
| DBxref | InterPro:IPR006218 |
| DBxref | InterPro:IPR013785 |
| DBxref | PFAM:PF00793 |
| Product | Phospho-2-dehydro-3-deoxyheptonate aldolase amt16 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2715930..2717280 - |
|
