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KYF_002279-T1, KYF_002279-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002279-T1
Unique NameKYF_002279-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3000068..3000744+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002279-T1 ID=KYF_002279-T1|Name=KYF_002279-T1|organism=Aspergillus niger KYF3|type=mRNA|length=677bp|location=Sequence derived from alignment at ch2:3000068..3000744+ (Aspergillus niger KYF3)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGGTAAGTGCTATTCTACTTATAGTCATA
GGAGACTCATTTCGCTGACGTATTCCTATCGCTGCAACTTAGAGTCATGC
TCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGG
AACTATTCTCGGCCCCCCTCACGTTCGTCCCACGCCTCCGACTCGCATCC
GTTATACTATACAATAGCATCACTGACATAATGAACGAGCGCAGAGTGTC
CATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCC
CGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCG
TTGATGGCCGGAGCGGAAAGGTAAGGATTCGTCCTATCCCGACCGCTACT
ATATGAAAGATTCCAAGTTGACTTCAAGCTAGGTCGATCCTACCAAGCTG
CCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGT
CGAGCTCAGAAGGTAATTATGTCCTGGCCTTCAGGCCATCGGTGACTTGA
TACTAATAGTTCCTAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCC
CAGCCTCCGGAAGGCTCGAACTTCTAA
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Coding sequence (CDS) from alignment at ch2:3000068..3000744+

>KYF_002279-T1 ID=KYF_002279-T1|Name=KYF_002279-T1|organism=Aspergillus niger KYF3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch2:3000068..3000744+ (Aspergillus niger KYF3)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATG
GTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTCGGCCCCCCT
CACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCC
GGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACT
TGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCC
TGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGA
GCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTC
CGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGA
CTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATG
CTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACG
GAACTATTCTCGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGC
GTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCA
ATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGG
TCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACC
ATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCA
CAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTA
AAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAG
GGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACAT
GATGATGAGTAACTGGAACGGAACTATTCTCGGCCCCCCTCACAGTGTCC
ATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCC
GACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGT
TGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTC
AGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGA
TATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTC
GAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAG
AGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGT
CTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCT
CGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCC
ATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCC
CGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTAC
CAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTA
TTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTT
CCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAG
AAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAG
CTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGT
AACTGGAACGGAACTATTCTCGGCCCCCCTCACAGTGTCCATGAGAACAG
AATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCC
CTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGG
AGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCG
CGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTC
TGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPM2KYF_002279Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002279-T1KYF_002279-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002279-T1.exon1KYF_002279-T1.exon1Aspergillus niger KYF3exon
KYF_002279-T1.exon2KYF_002279-T1.exon2Aspergillus niger KYF3exon
KYF_002279-T1.exon3KYF_002279-T1.exon3Aspergillus niger KYF3exon
KYF_002279-T1.exon4KYF_002279-T1.exon4Aspergillus niger KYF3exon
KYF_002279-T1.exon5KYF_002279-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002279-T1.cdsKYF_002279-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264UD3
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme spm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3000068..3000744 +
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