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KYF_002289-T1, KYF_002289-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002289-T1
Unique NameKYF_002289-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3020826..3022109-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002289-T1 ID=KYF_002289-T1|Name=KYF_002289-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1284bp|location=Sequence derived from alignment at ch2:3020826..3022109- (Aspergillus niger KYF3)
ATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTTTGGTCTTGC
ATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTGCTCGCGGGC
CTGGTTCTCATACGTATATGCCCATCCGACATATTACTATCACAGCAGAG
AAGCAAAACGCATACTGATGATGGAGGACGACGGAAAATCTAGGATTCGC
ACAATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGCAGA
CCGTACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCA
CCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCC
GTTCGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCGCGT
TTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCG
AGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGC
AGGAAGGTGAGCAAAACACACACGAGCACGAAAACAATGCGCTCAGCATC
AGGGACTTGTCAATTGACCAAACGCCCAATATCTCTAGGACGACACCCTC
ATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCATCCACCCAGACGG
ACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACAC
CATCAACCTACACAGCCCTAGAACCACACCCTCAGCCCATCCAAACAAAC
GCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCA
CCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGT
CCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCC
ATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGC
CCTCATCTCCCTATGGGATACAACGGACTGGATCTGCAAGCGTACTGTCT
CGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGT
AGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTT
GGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGG
GAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGG
TATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGCCCAGGCGGTTT
GAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAG
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Coding sequence (CDS) from alignment at ch2:3020826..3022109-

>KYF_002289-T1 ID=KYF_002289-T1|Name=KYF_002289-T1|organism=Aspergillus niger KYF3|type=CDS|length=3366bp|location=Sequence derived from alignment at ch2:3020826..3022109- (Aspergillus niger KYF3)
GACGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCAT
CCACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGC
CCACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAGCCC
ATCCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTC
CCCAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCA
TCTCTTACCCGTCCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCT
GCTTGCCTTTCCATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGG
GGGCAGCGACGCCCTCATCTCCCTATGGGATACAACGGACTGGATCTGCA
AGCGTACTGTCTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGG
AGCTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGG
TGGTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATA
CCGTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGG
CATCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGG
CCCAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGGATT
CGCACAATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGC
AGACCGTACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACT
CCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAAC
CCCGTTCGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCG
CGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAG
GCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTT
GGCAGGAAGATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTT
TGGTCTTGCATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTG
CTCGCGGGCCTGGTTCTCATACGACGACACCCTCATACCCATCTCCGTCG
AATCCCCCTCCACCCCAACCATCCACCCAGACGGACCACTCAACGCTGCA
GCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAGC
CCTAGAACCACACCCTCAGCCCATCCAAACAAACGCAACGACCTTCTCAC
ATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGACC
GGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGCCAATCTCCA
CACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCTTAGCACCTA
CAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATGG
GATACAACGGACTGGATCTGCAAGCGTACTGTCTCGAGCAATAACGGTGG
AGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGCG
CTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGCG
GAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATTC
GGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATATT
CTACTACTGCGGATGGATCGGGCCCAGGCGGTTTGAGAATTGTAGGGGCT
GCGGGTGGAAGTTTGTAGGATTCGCACAATAGCCTGGAACCCTACCGGTC
AACTTATTGCCACCGGCTCCGCAGACCGTACCCTTCGGATCTGGAACCCT
GAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGG
AATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCCAGCT
GCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGC
GTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGC
TGATGGAAGGGTAATGATCGTTGGCAGGAAGATGGCGCCTCCTCGACGGA
ATCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAAAACA
CAGAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCTCATACGACGAC
ACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCATCCACCC
AGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCT
TCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAGCCCATCCAA
ACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGA
CCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTT
ACCCGTCCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCTGCTTGC
CTTTCCATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGGGGGCAG
CGACGCCCTCATCTCCCTATGGGATACAACGGACTGGATCTGCAAGCGTA
CTGTCTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTC
GACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAA
TGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTC
CTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCT
TCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGCCCAGG
CGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGGATTCGCACA
ATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGCAGACCG
TACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCG
AACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTT
CGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCGCGTTTG
GGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGG
CATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGG
AAGATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTTTGGTCT
TGCATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTGCTCGCG
GGCCTGGTTCTCATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002289KYF_002289Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002289-T1KYF_002289-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002289-T1.cdsKYF_002289-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002289-T1.exon3KYF_002289-T1.exon3Aspergillus niger KYF3exon
KYF_002289-T1.exon2KYF_002289-T1.exon2Aspergillus niger KYF3exon
KYF_002289-T1.exon1KYF_002289-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3020826..3022109 -
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