|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3158110..3159538- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002338-T1 ID=KYF_002338-T1|Name=KYF_002338-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1429bp|location=Sequence derived from alignment at ch2:3158110..3159538- (Aspergillus niger KYF3)
ATGTCTGATCGCGCCTCCTCGGCATCATTTCGAGCAGGACCTCCATCACC
ATCATCTCCCGCCGCAGGGACTCTCAAGCAAAACCAGTTACCAGCTCCCT
TATCCGATCGAATTCCACAGACTCCGACATCACCTCCGTTGATGTCGGTA
AGCGCTCAGAACTATGCCACCAACTTTGTATCCTCGCAAGCATCACCTAA
CCAGGCGACCTCTCAATCCGCAACCCTCTCATCACCCCCGTCCTCTGCTC
CGATGTCCACCCAAGCCTCGCAACAACCGACGGTAGGTACGGCGAATTCG
TTTCCGACGCCGGCCAGCAGCGTGAGCGGGCACTTCCCGGGTGCGACTTC
CTTCGATGATCCTGAAAATACAGATAAGCCAATGGGCTCGACAGTTCCAG
ACACAGGTGCGCAAACAGCGAACATGAATGCCGCGGCCATACAGCAGGCA
GAACACAGACGGACAGATCATGACCGGCATACAGAAGGTATAAAAATGGA
AGTTGGAGTCCGCGATTTTGCTGTGAACCACGGAGGCGACGCTATGGATA
TCGATAGTGAGGCGCCGGCTTCATCCAGTCGCAGTGAGCCAAGCTTGGAA
TCCTTGCAGAAGAACTTTTCGTCTGCCTTTCATGTTTGCAAAAGCTGTAA
GAGCTCCCCAGTCCTTGGCATGGCTGTTGCCACAATTTGCAATGCACTCT
CTCCCATCTTATATTTGGATTGAGCTTTGTTAACACACGTGGCTTTATGA
AAATGCAGCCCATATTGCGACTGGACCGGATCCATCGCTAGATCTCATCT
CACTGTACGGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGGATCCT
GTGACAGGCGAGAAGATCAACAGGCTCAGGAAATCCTATGAAGGAAAGCT
GAAGGGCTTGGGACTCGCAGGCAGGAACAAGCCAGTGAAGACCGAGCCTG
GTGCGCCCGGAAGCCTCAGGCACATGACCATGTGGCCAGAGGAAGAATGG
CAAAACCAAAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGACATGGACTC
TGCGCTGCACAGCTTGCAGATGAGGGCCATGAAGATGGAGCCGGGCACGG
TACCGAACAATGAGTATTGGGAAGACGTGCTGGGGCACGAGAAGCCATCT
AAGCACGCCGGTGGCGACGCCAGCAAAAAGGGCGTCGCACCCCCTCCCAA
CGGAGTCCGGATTCCCCAACCGAATGGAACCCCAGCGCCTGTTTCAGACC
AAGAGCGATCCCGACCCAGCAGGGGACGTAAACGGCATTACGACGACAAC
AGTTTTGTTGGTTACGGCGAAGGTTACGCAGACGATGATGACGATGGGGC
ATTTTATTCAAACAGTGAAGGCATGGGGAAGAAAAAACGGAAGAAGGTAG
GGCGTTCGGACGGTGAAATGGCATTCTAA back to topCoding sequence (CDS) from alignment at ch2:3158110..3159538- >KYF_002338-T1 ID=KYF_002338-T1|Name=KYF_002338-T1|organism=Aspergillus niger KYF3|type=CDS|length=2634bp|location=Sequence derived from alignment at ch2:3158110..3159538- (Aspergillus niger KYF3)
CCCATATTGCGACTGGACCGGATCCATCGCTAGATCTCATCTCACTGTAC
GGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGGATCCTGTGACAGG
CGAGAAGATCAACAGGCTCAGGAAATCCTATGAAGGAAAGCTGAAGGGCT
TGGGACTCGCAGGCAGGAACAAGCCAGTGAAGACCGAGCCTGGTGCGCCC
GGAAGCCTCAGGCACATGACCATGTGGCCAGAGGAAGAATGGCAAAACCA
AAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGACATGGACTCTGCGCTGC
ACAGCTTGCAGATGAGGGCCATGAAGATGGAGCCGGGCACGGTACCGAAC
AATGAGTATTGGGAAGACGTGCTGGGGCACGAGAAGCCATCTAAGCACGC
CGGTGGCGACGCCAGCAAAAAGGGCGTCGCACCCCCTCCCAACGGAGTCC
GGATTCCCCAACCGAATGGAACCCCAGCGCCTGTTTCAGACCAAGAGCGA
TCCCGACCCAGCAGGGGACGTAAACGGCATTACGACGACAACAGTTTTGT
TGGTTACGGCGAAGGTTACGCAGACGATGATGACGATGGGGCATTTTATT
CAAACAGTGAAGGCATGGGGAAGAAAAAACGGAAGAAGGTAGGGCGTTCG
GACGGTGAAATGGCATTCTAAATGTCTGATCGCGCCTCCTCGGCATCATT
TCGAGCAGGACCTCCATCACCATCATCTCCCGCCGCAGGGACTCTCAAGC
AAAACCAGTTACCAGCTCCCTTATCCGATCGAATTCCACAGACTCCGACA
TCACCTCCGTTGATGTCGGTAAGCGCTCAGAACTATGCCACCAACTTTGT
ATCCTCGCAAGCATCACCTAACCAGGCGACCTCTCAATCCGCAACCCTCT
CATCACCCCCGTCCTCTGCTCCGATGTCCACCCAAGCCTCGCAACAACCG
ACGGTAGGTACGGCGAATTCGTTTCCGACGCCGGCCAGCAGCGTGAGCGG
GCACTTCCCGGGTGCGACTTCCTTCGATGATCCTGAAAATACAGATAAGC
CAATGGGCTCGACAGTTCCAGACACAGGTGCGCAAACAGCGAACATGAAT
GCCGCGGCCATACAGCAGGCAGAACACAGACGGACAGATCATGACCGGCA
TACAGAAGGTATAAAAATGGAAGTTGGAGTCCGCGATTTTGCTGTGAACC
ACGGAGGCGACGCTATGGATATCGATAGTGAGGCGCCGGCTTCATCCAGT
CGCAGTGAGCCAAGCTTGGAATCCTTGCAGAAGAACTTTTCGTCTGCCTT
TCATGTTTGCAAAAGCTCCCATATTGCGACTGGACCGGATCCATCGCTAG
ATCTCATCTCACTGTACGGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGG
ATGGATCCTGTGACAGGCGAGAAGATCAACAGGCTCAGGAAATCCTATGA
AGGAAAGCTGAAGGGCTTGGGACTCGCAGGCAGGAACAAGCCAGTGAAGA
CCGAGCCTGGTGCGCCCGGAAGCCTCAGGCACATGACCATGTGGCCAGAG
GAAGAATGGCAAAACCAAAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGA
CATGGACTCTGCGCTGCACAGCTTGCAGATGAGGGCCATGAAGATGGAGC
CGGGCACGGTACCGAACAATGAGTATTGGGAAGACGTGCTGGGGCACGAG
AAGCCATCTAAGCACGCCGGTGGCGACGCCAGCAAAAAGGGCGTCGCACC
CCCTCCCAACGGAGTCCGGATTCCCCAACCGAATGGAACCCCAGCGCCTG
TTTCAGACCAAGAGCGATCCCGACCCAGCAGGGGACGTAAACGGCATTAC
GACGACAACAGTTTTGTTGGTTACGGCGAAGGTTACGCAGACGATGATGA
CGATGGGGCATTTTATTCAAACAGTGAAGGCATGGGGAAGAAAAAACGGA
AGAAGGTAGGGCGTTCGGACGGTGAAATGGCATTCTAAATGTCTGATCGC
GCCTCCTCGGCATCATTTCGAGCAGGACCTCCATCACCATCATCTCCCGC
CGCAGGGACTCTCAAGCAAAACCAGTTACCAGCTCCCTTATCCGATCGAA
TTCCACAGACTCCGACATCACCTCCGTTGATGTCGGTAAGCGCTCAGAAC
TATGCCACCAACTTTGTATCCTCGCAAGCATCACCTAACCAGGCGACCTC
TCAATCCGCAACCCTCTCATCACCCCCGTCCTCTGCTCCGATGTCCACCC
AAGCCTCGCAACAACCGACGGTAGGTACGGCGAATTCGTTTCCGACGCCG
GCCAGCAGCGTGAGCGGGCACTTCCCGGGTGCGACTTCCTTCGATGATCC
TGAAAATACAGATAAGCCAATGGGCTCGACAGTTCCAGACACAGGTGCGC
AAACAGCGAACATGAATGCCGCGGCCATACAGCAGGCAGAACACAGACGG
ACAGATCATGACCGGCATACAGAAGGTATAAAAATGGAAGTTGGAGTCCG
CGATTTTGCTGTGAACCACGGAGGCGACGCTATGGATATCGATAGTGAGG
CGCCGGCTTCATCCAGTCGCAGTGAGCCAAGCTTGGAATCCTTGCAGAAG
AACTTTTCGTCTGCCTTTCATGTTTGCAAAAGCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013942 |
| DBxref | PFAM:PF08633 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3158110..3159538 - |
|
