You are here

Home

KYF_002353-T1, KYF_002353-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002353-T1
Unique NameKYF_002353-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3201771..3203330+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002353-T1 ID=KYF_002353-T1|Name=KYF_002353-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1560bp|location=Sequence derived from alignment at ch2:3201771..3203330+ (Aspergillus niger KYF3)
ATGGAACTCGAATTCCATCGAGGACGAAGAGTGGCGCAGAACCAGATTCC
GTCCCAGGCATACGGTCTCCGAGCCCCAGTGTCGAACTCAAAACCACCGG
GGCCCCAGTATAGCATGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGC
GGTGCCGCTAATCTGCTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTC
CACTGCTACTGCTGCTACCACTTCAACAACTCCTGCCACTATCACAACCA
CAGTCCCTGCTCTTGCTTCCATACCTACAACTACTACAGCACCAGCAGGG
ACCAACAACCTCCAGCACCCCACCCCCGACATAGGCCTTGCCGGCACCAA
CAATGACGGCTGGTCTGCACGGGTACTAGACGAACTAAAGGACCTGCTCC
TTCTTCTCAGTCACGATGGGCAGGTTCTATACGCGTCACCATCATGCTCT
GAGGTGACAGGGATTGAATCGCACATGCTAGAACAAAGCGATTTCTCCCG
TTTCGTCCATGAAGACGACAAGCCTATCCTAGGCCACGAATTGGACGAGT
GCATCAAGACTGGACGCGAAATACGATGTCACTTCCGGCTCTGTAGGCCT
GACAGTAGCTCCTGTTTATTAGAAGCACATGGACATCCACACCTGATGAC
GACCGGAACTGCTCCTTCTGCGACCGCAGAATCATCCCAACAGCCGCAAC
GGAAGACAGTTTGTAAAGGGATATTTCTCGTCTGTCGGCCATACCCAACA
CGGGGGTCACAGTTACTCGATTCGTTTTTGGAACACAAAATTGAGAACAT
CCGGCTGAACCAGCGCATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGT
TGAATTCGAGACCAGGGCAGACGTCAACGACAACGACGACCAGCACCACT
ACCACGACAACAACGCGCCAGACGTATGTCTCAACGACACAGACCTCGTT
TGCACAACGAGATACATCAGTATCTGGAGAGGAGAATGAATCATCCGATA
CAGTCACCAATACGGACGACGCCGATTCACGATCGTTTCTGGAGCAGGTT
GGAGATCGGTTGCCGCAGACTGAAGACATGTCTCATATTGACGGGATTGA
GGTCATGACGGGTTTGTACTACGGAGAAGGAGAACGTTCACAGGGATTGA
GTACGGGAGTCCGTCATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCG
AATGCCGTTGCTGCCGGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCA
ACAACAGCAGCAGCAGCAGCAGCAACCGTCGCAGGTGCAACCGCAATCAC
AGCCCAAGAACCCTGCAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGG
GAGTATATGTGCACGGATTGCGGGACGTCGGATTCACCCGAGTGGAGGAA
AGGCCCGGAAGGGCCGAAGACCCTGTGTAACGCTTGTGGATGTGAGTTCT
CCCCCTCCTTGATCATCTGACTATATAAATTCTGTATCAGTATTAACAGT
GAAATGTGAACAGTACGTTGGGCCAAGAAAGAGAAAAAACGCCAGGATTT
AGGGCCGTAG
back to top

Coding sequence (CDS) from alignment at ch2:3201771..3203330+

>KYF_002353-T1 ID=KYF_002353-T1|Name=KYF_002353-T1|organism=Aspergillus niger KYF3|type=CDS|length=2976bp|location=Sequence derived from alignment at ch2:3201771..3203330+ (Aspergillus niger KYF3)
ATGGAACTCGAATTCCATCGAGGACGAAGAGTGGCGCAGAACCAGATTCC
GTCCCAGGCATACGGTCTCCGAGCCCCAGTGTCGAACTCAAAACCACCGG
GGCCCCAGTATAGCATGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGC
GGTGCCGCTAATCTGCTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTC
CACTGCTACTGCTGCTACCACTTCAACAACTCCTGCCACTATCACAACCA
CAGTCCCTGCTCTTGCTTCCATACCTACAACTACTACAGCACCAGCAGGG
ACCAACAACCTCCAGCACCCCACCCCCGACATAGGCCTTGCCGGCACCAA
CAATGACGGCTGGTCTGCACGGGTACTAGACGAACTAAAGGACCTGCTCC
TTCTTCTCAGTCACGATGGGCAGGTTCTATACGCGTCACCATCATGCTCT
GAGGTGACAGGGATTGAATCGCACATGCTAGAACAAAGCGATTTCTCCCG
TTTCGTCCATGAAGACGACAAGCCTATCCTAGGCCACGAATTGGACGAGT
GCATCAAGACTGGACGCGAAATACGATGTCACTTCCGGCTCTGTAGGCCT
GACAGTAGCTCCTGTTTATTAGAAGCACATGGACATCCACACCTGATGAC
GACCGGAACTGCTCCTTCTGCGACCGCAGAATCATCCCAACAGCCGCAAC
GGAAGACAGTTTGTAAAGGGATATTTCTCGTCTGTCGGCCATACCCAACA
CGGGGGTCACAGTTACTCGATTCGTTTTTGGAACACAAAATTGAGAACAT
CCGGCTGAACCAGCGCATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGT
TGAATTCGAGACCAGGGCAGACGTCAACGACAACGACGACCAGCACCACT
ACCACGACAACAACGCGCCAGACGTATGTCTCAACGACACAGACCTCGTT
TGCACAACGAGATACATCAGTATCTGGAGAGGAGAATGAATCATCCGATA
CAGTCACCAATACGGACGACGCCGATTCACGATCGTTTCTGGAGCAGGTT
GGAGATCGGTTGCCGCAGACTGAAGACATGTCTCATATTGACGGGATTGA
GGTCATGACGGGTTTGTACTACGGAGAAGGAGAACGTTCACAGGGATTGA
GTACGGGAGTCCGTCATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCG
AATGCCGTTGCTGCCGGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCA
ACAACAGCAGCAGCAGCAGCAGCAACCGTCGCAGGTGCAACCGCAATCAC
AGCCCAAGAACCCTGCAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGG
GAGTATATGTGCACGGATTGCGGGACGTCGGATTCACCCGAGTGGAGGAA
AGGCCCGGAAGGGCCGAAGACCCTGTGTAACGCTTGTGGATTACGTTGGG
CCAAGAAAGAGAAAAAACGCCAGGATTTAGGGCCGTAGATGGAACTCGAA
TTCCATCGAGGACGAAGAGTGGCGCAGAACCAGATTCCGTCCCAGGCATA
CGGTCTCCGAGCCCCAGTGTCGAACTCAAAACCACCGGGGCCCCAGTATA
GCATGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGCGGTGCCGCTAAT
CTGCTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTCCACTGCTACTGC
TGCTACCACTTCAACAACTCCTGCCACTATCACAACCACAGTCCCTGCTC
TTGCTTCCATACCTACAACTACTACAGCACCAGCAGGGACCAACAACCTC
CAGCACCCCACCCCCGACATAGGCCTTGCCGGCACCAACAATGACGGCTG
GTCTGCACGGGTACTAGACGAACTAAAGGACCTGCTCCTTCTTCTCAGTC
ACGATGGGCAGGTTCTATACGCGTCACCATCATGCTCTGAGGTGACAGGG
ATTGAATCGCACATGCTAGAACAAAGCGATTTCTCCCGTTTCGTCCATGA
AGACGACAAGCCTATCCTAGGCCACGAATTGGACGAGTGCATCAAGACTG
GACGCGAAATACGATGTCACTTCCGGCTCTGTAGGCCTGACAGTAGCTCC
TGTTTATTAGAAGCACATGGACATCCACACCTGATGACGACCGGAACTGC
TCCTTCTGCGACCGCAGAATCATCCCAACAGCCGCAACGGAAGACAGTTT
GTAAAGGGATATTTCTCGTCTGTCGGCCATACCCAACACGGGGGTCACAG
TTACTCGATTCGTTTTTGGAACACAAAATTGAGAACATCCGGCTGAACCA
GCGCATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGTTGAATTCGAGAC
CAGGGCAGACGTCAACGACAACGACGACCAGCACCACTACCACGACAACA
ACGCGCCAGACGTATGTCTCAACGACACAGACCTCGTTTGCACAACGAGA
TACATCAGTATCTGGAGAGGAGAATGAATCATCCGATACAGTCACCAATA
CGGACGACGCCGATTCACGATCGTTTCTGGAGCAGGTTGGAGATCGGTTG
CCGCAGACTGAAGACATGTCTCATATTGACGGGATTGAGGTCATGACGGG
TTTGTACTACGGAGAAGGAGAACGTTCACAGGGATTGAGTACGGGAGTCC
GTCATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCGAATGCCGTTGCT
GCCGGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCAACAACAGCAGCA
GCAGCAGCAGCAACCGTCGCAGGTGCAACCGCAATCACAGCCCAAGAACC
CTGCAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGGGAGTATATGTGC
ACGGATTGCGGGACGTCGGATTCACCCGAGTGGAGGAAAGGCCCGGAAGG
GCCGAAGACCCTGTGTAACGCTTGTGGATTACGTTGGGCCAAGAAAGAGA
AAAAACGCCAGGATTTAGGGCCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002353KYF_002353Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002353-T1.exon1KYF_002353-T1.exon1Aspergillus niger KYF3exon
KYF_002353-T1.exon2KYF_002353-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002353-T1.cdsKYF_002353-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002353-T1KYF_002353-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035965
DBxrefInterPro:IPR013088
DBxrefInterPro:IPR013655
DBxrefInterPro:IPR000014
DBxrefInterPro:IPR000679
DBxrefPFAM:PF08447
DBxrefPFAM:PF00320
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3201771..3203330 +
Powered by Drupal