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KYF_002460-T1, KYF_002460-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002460-T1
Unique NameKYF_002460-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3531471..3532370-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002460-T1 ID=KYF_002460-T1|Name=KYF_002460-T1|organism=Aspergillus niger KYF3|type=mRNA|length=900bp|location=Sequence derived from alignment at ch2:3531471..3532370- (Aspergillus niger KYF3)
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTGAGCT
CTAGCAACATAAGAGGTTGATCGCAACGCTGGGTATGAGCTAACGAAAAT
TTCGTCGGATAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCC
CAAGTTCTGGGTAATTATACGCCAAAATGCGACTGGAGTGATTGGGACTA
ACGCGGAATAACTAGAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAG
ATGGTTTGCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCAT
CTACCTCGAGAACAAGGTATGCTCGACCTAGCTACTCTCCGCAAACTCGC
GATGCGCTAACGCAATTCTTTAATAGACCCCTATCGGCAAGGTCGATGAA
GTCCTGGGCCCTATCAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGG
AATTGTCGCGACCTCCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCG
ACAAGCTCCTTCCCTTGGAGAAGTATGTTGCGAGTTGTTCTTGATCATGA
TGGAAACTTGTCTAACTTTGCAAAACTAGGTTCCTTCCCAAGCCCAAGCC
CGCTCCCGGTATGATTTCACTCGCTTCGCGCAACAATCCAATGTGCTTGA
TCCTAACCAGAATACAGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
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Coding sequence (CDS) from alignment at ch2:3531471..3532370-

>KYF_002460-T1 ID=KYF_002460-T1|Name=KYF_002460-T1|organism=Aspergillus niger KYF3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch2:3531471..3532370- (Aspergillus niger KYF3)
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0001522pseudouridine synthesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002460KYF_002460Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002460-T1KYF_002460-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002460-T1.cdsKYF_002460-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002460-T1.exon6KYF_002460-T1.exon6Aspergillus niger KYF3exon
KYF_002460-T1.exon5KYF_002460-T1.exon5Aspergillus niger KYF3exon
KYF_002460-T1.exon4KYF_002460-T1.exon4Aspergillus niger KYF3exon
KYF_002460-T1.exon3KYF_002460-T1.exon3Aspergillus niger KYF3exon
KYF_002460-T1.exon2KYF_002460-T1.exon2Aspergillus niger KYF3exon
KYF_002460-T1.exon1KYF_002460-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR038664
DBxrefInterPro:IPR007504
DBxrefPFAM:PF04410
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3531471..3532370 -
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