You are here

Home

KYF_002494-T1, KYF_002494-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002494-T1
Unique NameKYF_002494-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3615800..3617463-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002494-T1 ID=KYF_002494-T1|Name=KYF_002494-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1664bp|location=Sequence derived from alignment at ch2:3615800..3617463- (Aspergillus niger KYF3)
ATGACATACAACATTGCGTGAGTGCCTGCTTGCGTTCTGAACAATCAATC
AATCAAGGTTGGCCTACTAATCAACGGCCCACAGTATGGTCAGTGACTTT
TTCTTTCCCCAACCAGGTCAGTCGTTCTGTCTCATTCTCTTGTCTCTCCG
ACGACCAGCTACTGATGGTCCCAGGCGGGATTGAAAGTCACATCTATCAG
CTATCGACCGTAAGATTGCTAGACCTCTCGCTCGAGCCAACGCTTATCGC
TCTATAGAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATG
CCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGGGCTCAAAGTT
TACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGACGGT
CTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTC
AAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAGCTATT
CTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCATTCGCT
GTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGT
TCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCATACATGGTAC
GTCAACTACATGGATTATACTGAAAGCATACTAACTTTAAGGGCTAGCAA
AGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTTA
TTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCA
ATCGCGCGACTTATGGAGCCCAATGATATTATCACGATCGTTGTCATATC
TCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCTC
GGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGA
CCCAAGGCCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGCAGGA
CAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTGA
TGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGT
ACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCACACG
CGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCGA
AACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCA
TTACGTTCGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCAAGAT
GATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTTTACCAAG
GCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGA
CAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCATTGA
TCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTTT
GCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGG
TTTCCCCGTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAATTAA
CCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTGG
GACCTGCATCTTGA
back to top

Coding sequence (CDS) from alignment at ch2:3615800..3617463-

>KYF_002494-T1 ID=KYF_002494-T1|Name=KYF_002494-T1|organism=Aspergillus niger KYF3|type=CDS|length=7200bp|location=Sequence derived from alignment at ch2:3615800..3617463- (Aspergillus niger KYF3)
CAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTG
TTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGG
CCAATCGCGCGACTTATGGAGCCCAATGATATTATCACGATCGTTGTCAT
ATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTC
CTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCA
GGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGCA
GGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACG
TGATGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTT
GGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCAC
ACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTG
CGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCA
GCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCAA
GATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTTTACC
AAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCC
GGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCAT
TGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGT
TTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATG
TGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAAT
TAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTC
TGGGACCTGCATCTTGAAAGCTTATCGATCGCGGCCATAAAGTCATCATC
ATCACCCATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGG
GCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCA
TGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGT
GAGCAAATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCA
CGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCG
ACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAG
CTGCTCAAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCA
TACATGGCGGGATTGAAAGTCACATCTATCAGCTATCGACCTATGGTCAG
TGACTTTTTCTTTCCCCAACCAGATGACATACAACATTGCCAAAGAGAAC
ACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTTATTCCCAA
TGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCAATCGCGC
GACTTATGGAGCCCAATGATATTATCACGATCGTTGTCATATCTCGTCTT
TTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCTCGGATCCT
TGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGACCCAAGG
CCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGCAGGACAAGGTT
GAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTGATGATCCG
GGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGTACTGTCC
TTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCACACGCGTCGGT
GGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCGAAACCGGA
GGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTACGTT
CGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCAAGATGATGTAT
TCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTTTACCAAGGCATCTC
CGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGACAGGGAT
GGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCATTGATCGCCTA
AAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTTTGCCTCTG
CGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTTCCCC
GTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAATTAACCGAAAG
GAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTGGGACCTGC
ATCTTGAAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATG
CCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGGGCTCAAAGTT
TACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGACGGT
CTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTC
AAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAGCTATT
CTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCATTCGCT
GTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGT
TCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCATACATGGCGG
GATTGAAAGTCACATCTATCAGCTATCGACCTATGGTCAGTGACTTTTTC
TTTCCCCAACCAGATGACATACAACATTGCCAAAGAGAACACGGTGCTTC
GAGCCTCGCTAGACCCGTTGATGGTCTCTGTTATTCCCAATGCGGTGGTT
GCAGAGAACTTCCGACCACCAGAACCACGGCCAATCGCGCGACTTATGGA
GCCCAATGATATTATCACGATCGTTGTCATATCTCGTCTTTTCTACAATA
AAGGAACCGATCTCCTTATTGCCGCCATTCCTCGGATCCTTGCCTCTCAT
CCGAATGTACGGTTCATCATTGCCGGATCAGGACCCAAGGCCATCGATCT
CGAACAGATGCTAGAAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTG
GTTCGGTGCGACACGAAGAGGTCCGTGACGTGATGATCCGGGGCCACATT
TATTTACATCCGAGTTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGC
TGCAAGCTGTGGTCTCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTG
AGGTGCTTCCTCAACACATGACAACTTTTGCGAAACCGGAGGAGGACGAT
ATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGT
CCGCACGGATCGGTTCCATGACCAGGTCAAGATGATGTATTCTTGGACGG
ATGTAGCTGAGCGTACGGAACGTGTTTACCAAGGCATCTCCGGGGACATT
AGCCCCGAGGAATTCTACGGCTACTACCCCGGACAGGGATGGGAGGCCGG
CCGGGATCGGGTGCGAAGCTTTGCCCTCATTGATCGCCTAAAACGATACT
ATGGATGCGGAGTGTGGGCAGGCAAGCTGTTTTGCCTCTGCGTGGTGATC
GACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATAT
CGACATTGCGCGCAGCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAAC
GGCCGGGGTCTACATATAAAGGCGACCGTCTGGGACCTGCATCTTGAAAG
CTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATGCCTACAAGGG
ACGCACTGGCGTTCGCTATCTCACCAATGGGCTCAAAGTTTACCATGTCC
CCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGACGGTCTTCTCATTC
TTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTCAAATTGTACA
TGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCC
GGACGATGGGCCTCCGTACGGTTTTCACCGACCATTCGCTGTTTGGATTC
GCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGTTCATTTTGAG
CGACGTAGACCATGTTATTTGTGTCAGCCATACATGGCGGGATTGAAAGT
CACATCTATCAGCTATCGACCTATGGTCAGTGACTTTTTCTTTCCCCAAC
CAGATGACATACAACATTGCCAAAGAGAACACGGTGCTTCGAGCCTCGCT
AGACCCGTTGATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAACT
TCCGACCACCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATGAT
ATTATCACGATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGA
TCTCCTTATTGCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGTAC
GGTTCATCATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGATG
CTAGAAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCG
ACACGAAGAGGTCCGTGACGTGATGATCCGGGGCCACATTTATTTACATC
CGAGTTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCTGT
GGTCTCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCC
TCAACACATGACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCTCG
CCACTGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGGAT
CGGTTCCATGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGA
GCGTACGGAACGTGTTTACCAAGGCATCTCCGGGGACATTAGCCCCGAGG
AATTCTACGGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATCGG
GTGCGAAGCTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGG
AGTGTGGGCAGGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTTAC
TTTATGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTGCG
CGCAGCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTC
TACATATAAAGGCGACCGTCTGGGACCTGCATCTTGAAAGCTTATCGATC
GCGGCCATAAAGTCATCATCATCACCCATGCCTACAAGGGACGCACTGGC
GTTCGCTATCTCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGT
GATCTACCGGGAGTCGACCATGCCGACGGTCTTCTCATTCTTCCCTATCT
TTCGAAACATAGTGATTCGTGAGCAAATTCAAATTGTACATGGCCATGCA
AGTTTGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATGGG
CCTCCGTACGGTTTTCACCGACCATTCGCTGTTTGGATTCGCAGATGCAG
CATCAATTCTTACCAACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGAC
CATGTTATTTGTGTCAGCCATACATGGCGGGATTGAAAGTCACATCTATC
AGCTATCGACCTATGGTCAGTGACTTTTTCTTTCCCCAACCAGATGACAT
ACAACATTGCCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTG
ATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACC
AGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATGATATTATCACGA
TCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATT
GCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCAT
TGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAGGA
ATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAG
GTCCGTGACGTGATGATCCGGGGCCACATTTATTTACATCCGAGTTTGAC
TGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACG
TGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATG
ACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAA
AGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCATG
ACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAA
CGTGTTTACCAAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGG
CTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCT
TTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCA
GGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTT
CTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTGGC
CCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAA
GGCGACCGTCTGGGACCTGCATCTTGAAAGCTTATCGATCGCGGCCATAA
AGTCATCATCATCACCCATGCCTACAAGGGACGCACTGGCGTTCGCTATC
TCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGG
GAGTCGACCATGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACAT
AGTGATTCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGTTTGAGCA
GCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACG
GTTTTCACCGACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCT
TACCAACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCATGTTATTT
GTGTCAGCCATACATGGCGGGATTGAAAGTCACATCTATCAGCTATCGAC
CTATGGTCAGTGACTTTTTCTTTCCCCAACCAGATGACATACAACATTGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GPI3KYF_002494Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002494-T1KYF_002494-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002494-T1.cdsKYF_002494-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002494-T1.exon5KYF_002494-T1.exon5Aspergillus niger KYF3exon
KYF_002494-T1.exon4KYF_002494-T1.exon4Aspergillus niger KYF3exon
KYF_002494-T1.exon3KYF_002494-T1.exon3Aspergillus niger KYF3exon
KYF_002494-T1.exon2KYF_002494-T1.exon2Aspergillus niger KYF3exon
KYF_002494-T1.exon1KYF_002494-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09262TO9
NoteCAZy:GT4
DBxrefInterPro:IPR001296
DBxrefInterPro:IPR013234
DBxrefPFAM:PF08288
DBxrefPFAM:PF13579
DBxrefPFAM:PF13692
DBxrefPFAM:PF13439
DBxrefPFAM:PF00534
ProductPhosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3615800..3617463 -
Powered by Drupal