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KYF_002622-T1, KYF_002622-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002622-T1
Unique NameKYF_002622-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3970974..3972194+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002622-T1 ID=KYF_002622-T1|Name=KYF_002622-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1221bp|location=Sequence derived from alignment at ch2:3970974..3972194+ (Aspergillus niger KYF3)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTGGA
CCTGTCCGATGCTGCTGATGGCTCCACCGTATGTGCTCTCAACCGTCTTC
CACCCTGGCTATCACGCTAACACCATCTAGATCACCTTCGAGGGCACCAC
TTCCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCCGCTTCGGTGGTA
AGGATCTGACCGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGT
TCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAA
GTTCATGTACATCCACGACGTTGAGGACTCGACCTTCAAGGGCATCAACA
TCAAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCAC
CTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCA
CAACACCGACGGTTTCGACATCAGCGAGTCCACCGGTGTCTACATCAGCG
GTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAG
GTACGATATCCCTATCCCACTATCATTCCTTCCATTCATATCGCTAACAA
TCAAACCCACAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCA
CGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGA
ACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGC
ATCAAGACCATCTACAAGGAGACCGGCGATGTCAGCGAGATCACCTACTC
CAACATCCAGCTCTCCGGCATCACCGACTACGGTATCGTCATCGAGCAGG
ACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATC
ACTGATGTCACTGTTGACGGTGTCACCGGCACTCTTGAGGATGACGCCAC
CCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGT
CCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTT
CCTTCCGGTGCTTCTTGCTAA
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Coding sequence (CDS) from alignment at ch2:3970974..3972194+

>KYF_002622-T1 ID=KYF_002622-T1|Name=KYF_002622-T1|organism=Aspergillus niger KYF3|type=CDS|length=3321bp|location=Sequence derived from alignment at ch2:3970974..3972194+ (Aspergillus niger KYF3)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTGGA
CCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGCACCACTT
CCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCCGCTTCGGTGGTAAG
GATCTGACCGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTC
CCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGT
TCATGTACATCCACGACGTTGAGGACTCGACCTTCAAGGGCATCAACATC
AAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCT
GAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACA
ACACCGACGGTTTCGACATCAGCGAGTCCACCGGTGTCTACATCAGCGGT
GCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAGAG
CATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTCTCCATCG
GCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGACCATCTCC
GACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGCATCAAGACCATCTA
CAAGGAGACCGGCGATGTCAGCGAGATCACCTACTCCAACATCCAGCTCT
CCGGCATCACCGACTACGGTATCGTCATCGAGCAGGACTACGAGAACGGC
TCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATGTCACTGT
TGACGGTGTCACCGGCACTCTTGAGGATGACGCCACCCAGGTCTACATTC
TCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGTTGACCTC
TCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCGGTGCTTC
TTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCC
TCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAG
GCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTC
CAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGA
CCCTGGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGC
ACCACTTCCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCCGCTTCGG
TGGTAAGGATCTGACCGTCACCATGGCCGACGGCGCTGTCATCGACGGTG
ACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAG
CCCAAGTTCATGTACATCCACGACGTTGAGGACTCGACCTTCAAGGGCAT
CAACATCAAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACG
TCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGT
GGCCACAACACCGACGGTTTCGACATCAGCGAGTCCACCGGTGTCTACAT
CAGCGGTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTG
GCGAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTC
TCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGAC
CATCTCCGACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGCATCAAGA
CCATCTACAAGGAGACCGGCGATGTCAGCGAGATCACCTACTCCAACATC
CAGCTCTCCGGCATCACCGACTACGGTATCGTCATCGAGCAGGACTACGA
GAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATG
TCACTGTTGACGGTGTCACCGGCACTCTTGAGGATGACGCCACCCAGGTC
TACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGT
TGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCG
GTGCTTCTTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTC
GGCTCCCTCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGC
TAAGAAGGCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGA
GCATCTCCAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCT
GGCGAGACCCTGGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCTT
CGAGGGCACCACTTCCTTCGGATACAAGGAATGGAAGGGTCCCCTGATCC
GCTTCGGTGGTAAGGATCTGACCGTCACCATGGCCGACGGCGCTGTCATC
GACGGTGACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAA
GACCAAGCCCAAGTTCATGTACATCCACGACGTTGAGGACTCGACCTTCA
AGGGCATCAACATCAAGAATACTCCCGTCCAGGCCATCAGTGTCCAGGCT
ACCAACGTCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGA
CAACGGTGGCCACAACACCGACGGTTTCGACATCAGCGAGTCCACCGGTG
TCTACATCAGCGGTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATC
AACTCTGGCGAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCA
CGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGA
ACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAATGGTGTCCGC
ATCAAGACCATCTACAAGGAGACCGGCGATGTCAGCGAGATCACCTACTC
CAACATCCAGCTCTCCGGCATCACCGACTACGGTATCGTCATCGAGCAGG
ACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATC
ACTGATGTCACTGTTGACGGTGTCACCGGCACTCTTGAGGATGACGCCAC
CCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGT
CCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTT
CCTTCCGGTGCTTCTTGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002622KYF_002622Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002622-T1.exon1KYF_002622-T1.exon1Aspergillus niger KYF3exon
KYF_002622-T1.exon2KYF_002622-T1.exon2Aspergillus niger KYF3exon
KYF_002622-T1.exon3KYF_002622-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002622-T1.cdsKYF_002622-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002622-T1KYF_002622-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3970974..3972194 +
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