You are here

KYF_002623-T1, KYF_002623-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002623-T1
Unique NameKYF_002623-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3974874..3976220-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002623-T1 ID=KYF_002623-T1|Name=KYF_002623-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1347bp|location=Sequence derived from alignment at ch2:3974874..3976220- (Aspergillus niger KYF3)
ATGAACAGCATCTACGGCATTCGGCCCTTGACCGGCAAAGTTGCCTTCGT TACCGGTGCAAACGGCATCAGTGGTAGCGCCATTGTCGACTATCTGGTTA AGCAGCCAGCCAATGAGTGGTATGTCATTGATTACTCTACCCATTCTTTC AGCAGACCACGCCTACTCATCACTATCTTAGGACGGAGATCATCATCACG TCGAGAAGCCCTATCAAGACCGTCTACACCGACCCAAGGGTGCGATTTGT CGCCATCGACTTCCTTGAGCCGGCCGAAGCTATCGTCGAGAAGCTCAAGG AGCTCTGTAAGGACGTGACCCATGCTTTTTATACCTCGTACATCCACAAC AATGACTTTTCGCAACTGTACAAGAAGAATGGTCCCCTTTTCCGTACCTT TATCGAAGCGGTGGATTTTGCCTGCCCCAAGTTGCAGCGTGTGGTGTTAC AAACTGGAGGCAAGGTGAGCAGGATATGCCATATTTCTCCGGTCTCAGGA CATAGGATTAGTCTGACTGCTGGAAGCATTATGGGTTCCAATTCAGGGAC ATTACAACCCCCATGTTGGAGAATATTCCTCGCTACGAAGGCCCTGAAAA CATCTTCTACTACGAGCAGGAAGATGACCTCTTTGCTGTTCAAAGACGCC GCAACACCTGGAGCTACAACATCATCCGCCCTATGGCCATCATTGGCTAC AGTTGCCAATGTACGCCTAGCCCCTCTCTATTTCCTTTGATTTTCATTGC TAGCATGCTAATCTCTCCCTCATTCCGGCAGACCTCGGAATCAACGAAAC TCTCCCACTAGCCCAATACTTCCTGATATGCCGAGAGCTTGGTGATGCCC CACGCTGGCCCGGCAATTTGCAGAGCTACCACCGCGTCGAGAAGCAGTCG TCCGCCCCGGGAATTGCCAATCTTACTGTCTGGGCTGCCACCCAGCCCCA CTGCAAGAATGAGGTCTTTAACCATGATGACGGGGATGTGATCGTCTGGA AGTTCCTTTGGCATTTGCTAGCCAGCTACTTCCAGGCCCCGATGGACAAG TTCGAGGCCCCTACCGAGACAACACAATCATTTGATCTGGCCGAGTGGGC TCAAGACAAGAAGCCTGTCTGGGAGCGCATTGTCACCAAGTATGGCGGCG ATCCAGAGGCGTTCCAGCTGGATGCCTTCAGGCTGATGAACTGGTATATC ACACCCGCGCCGAATATGGTTCCCTTTATCAGTACGGTCGCCAAAGCACG TCACTTTGGCTGGAACCACGGCGATGATACCTACCAGTCGTGGCTTAACA CCATGCGTGCTTACGAGAATGCTGGTGTGCTGCCGATTCTCCCATAA
back to top

Coding sequence (CDS) from alignment at ch2:3974874..3976220-

>KYF_002623-T1 ID=KYF_002623-T1|Name=KYF_002623-T1|organism=Aspergillus niger KYF3|type=CDS|length=4608bp|location=Sequence derived from alignment at ch2:3974874..3976220- (Aspergillus niger KYF3)
ACCTCGGAATCAACGAAACTCTCCCACTAGCCCAATACTTCCTGATATGC
CGAGAGCTTGGTGATGCCCCACGCTGGCCCGGCAATTTGCAGAGCTACCA
CCGCGTCGAGAAGCAGTCGTCCGCCCCGGGAATTGCCAATCTTACTGTCT
GGGCTGCCACCCAGCCCCACTGCAAGAATGAGGTCTTTAACCATGATGAC
GGGGATGTGATCGTCTGGAAGTTCCTTTGGCATTTGCTAGCCAGCTACTT
CCAGGCCCCGATGGACAAGTTCGAGGCCCCTACCGAGACAACACAATCAT
TTGATCTGGCCGAGTGGGCTCAAGACAAGAAGCCTGTCTGGGAGCGCATT
GTCACCAAGTATGGCGGCGATCCAGAGGCGTTCCAGCTGGATGCCTTCAG
GCTGATGAACTGGTATATCACACCCGCGCCGAATATGGTTCCCTTTATCA
GTACGGTCGCCAAAGCACGTCACTTTGGCTGGAACCACGGCGATGATACC
TACCAGTCGTGGCTTAACACCATGCGTGCTTACGAGAATGCTGGTGTGCT
GCCGATTCTCCCATAACATTATGGGTTCCAATTCAGGGACATTACAACCC
CCATGTTGGAGAATATTCCTCGCTACGAAGGCCCTGAAAACATCTTCTAC
TACGAGCAGGAAGATGACCTCTTTGCTGTTCAAAGACGCCGCAACACCTG
GAGCTACAACATCATCCGCCCTATGGCCATCATTGGCTACAGTTGCCAAT
GACGGAGATCATCATCACGTCGAGAAGCCCTATCAAGACCGTCTACACCG
ACCCAAGGGTGCGATTTGTCGCCATCGACTTCCTTGAGCCGGCCGAAGCT
ATCGTCGAGAAGCTCAAGGAGCTCTGTAAGGACGTGACCCATGCTTTTTA
TACCTCGTACATCCACAACAATGACTTTTCGCAACTGTACAAGAAGAATG
GTCCCCTTTTCCGTACCTTTATCGAAGCGGTGGATTTTGCCTGCCCCAAG
TTGCAGCGTGTGGTGTTACAAACTGGAGGCAAGATGAACAGCATCTACGG
CATTCGGCCCTTGACCGGCAAAGTTGCCTTCGTTACCGGTGCAAACGGCA
TCAGTGGTAGCGCCATTGTCGACTATCTGGTTAAGCAGCCAGCCAATGAG
TGACCTCGGAATCAACGAAACTCTCCCACTAGCCCAATACTTCCTGATAT
GCCGAGAGCTTGGTGATGCCCCACGCTGGCCCGGCAATTTGCAGAGCTAC
CACCGCGTCGAGAAGCAGTCGTCCGCCCCGGGAATTGCCAATCTTACTGT
CTGGGCTGCCACCCAGCCCCACTGCAAGAATGAGGTCTTTAACCATGATG
ACGGGGATGTGATCGTCTGGAAGTTCCTTTGGCATTTGCTAGCCAGCTAC
TTCCAGGCCCCGATGGACAAGTTCGAGGCCCCTACCGAGACAACACAATC
ATTTGATCTGGCCGAGTGGGCTCAAGACAAGAAGCCTGTCTGGGAGCGCA
TTGTCACCAAGTATGGCGGCGATCCAGAGGCGTTCCAGCTGGATGCCTTC
AGGCTGATGAACTGGTATATCACACCCGCGCCGAATATGGTTCCCTTTAT
CAGTACGGTCGCCAAAGCACGTCACTTTGGCTGGAACCACGGCGATGATA
CCTACCAGTCGTGGCTTAACACCATGCGTGCTTACGAGAATGCTGGTGTG
CTGCCGATTCTCCCATAACATTATGGGTTCCAATTCAGGGACATTACAAC
CCCCATGTTGGAGAATATTCCTCGCTACGAAGGCCCTGAAAACATCTTCT
ACTACGAGCAGGAAGATGACCTCTTTGCTGTTCAAAGACGCCGCAACACC
TGGAGCTACAACATCATCCGCCCTATGGCCATCATTGGCTACAGTTGCCA
ATGACGGAGATCATCATCACGTCGAGAAGCCCTATCAAGACCGTCTACAC
CGACCCAAGGGTGCGATTTGTCGCCATCGACTTCCTTGAGCCGGCCGAAG
CTATCGTCGAGAAGCTCAAGGAGCTCTGTAAGGACGTGACCCATGCTTTT
TATACCTCGTACATCCACAACAATGACTTTTCGCAACTGTACAAGAAGAA
TGGTCCCCTTTTCCGTACCTTTATCGAAGCGGTGGATTTTGCCTGCCCCA
AGTTGCAGCGTGTGGTGTTACAAACTGGAGGCAAGATGAACAGCATCTAC
GGCATTCGGCCCTTGACCGGCAAAGTTGCCTTCGTTACCGGTGCAAACGG
CATCAGTGGTAGCGCCATTGTCGACTATCTGGTTAAGCAGCCAGCCAATG
AGTGACCTCGGAATCAACGAAACTCTCCCACTAGCCCAATACTTCCTGAT
ATGCCGAGAGCTTGGTGATGCCCCACGCTGGCCCGGCAATTTGCAGAGCT
ACCACCGCGTCGAGAAGCAGTCGTCCGCCCCGGGAATTGCCAATCTTACT
GTCTGGGCTGCCACCCAGCCCCACTGCAAGAATGAGGTCTTTAACCATGA
TGACGGGGATGTGATCGTCTGGAAGTTCCTTTGGCATTTGCTAGCCAGCT
ACTTCCAGGCCCCGATGGACAAGTTCGAGGCCCCTACCGAGACAACACAA
TCATTTGATCTGGCCGAGTGGGCTCAAGACAAGAAGCCTGTCTGGGAGCG
CATTGTCACCAAGTATGGCGGCGATCCAGAGGCGTTCCAGCTGGATGCCT
TCAGGCTGATGAACTGGTATATCACACCCGCGCCGAATATGGTTCCCTTT
ATCAGTACGGTCGCCAAAGCACGTCACTTTGGCTGGAACCACGGCGATGA
TACCTACCAGTCGTGGCTTAACACCATGCGTGCTTACGAGAATGCTGGTG
TGCTGCCGATTCTCCCATAACATTATGGGTTCCAATTCAGGGACATTACA
ACCCCCATGTTGGAGAATATTCCTCGCTACGAAGGCCCTGAAAACATCTT
CTACTACGAGCAGGAAGATGACCTCTTTGCTGTTCAAAGACGCCGCAACA
CCTGGAGCTACAACATCATCCGCCCTATGGCCATCATTGGCTACAGTTGC
CAATGACGGAGATCATCATCACGTCGAGAAGCCCTATCAAGACCGTCTAC
ACCGACCCAAGGGTGCGATTTGTCGCCATCGACTTCCTTGAGCCGGCCGA
AGCTATCGTCGAGAAGCTCAAGGAGCTCTGTAAGGACGTGACCCATGCTT
TTTATACCTCGTACATCCACAACAATGACTTTTCGCAACTGTACAAGAAG
AATGGTCCCCTTTTCCGTACCTTTATCGAAGCGGTGGATTTTGCCTGCCC
CAAGTTGCAGCGTGTGGTGTTACAAACTGGAGGCAAGATGAACAGCATCT
ACGGCATTCGGCCCTTGACCGGCAAAGTTGCCTTCGTTACCGGTGCAAAC
GGCATCAGTGGTAGCGCCATTGTCGACTATCTGGTTAAGCAGCCAGCCAA
TGAGTGACCTCGGAATCAACGAAACTCTCCCACTAGCCCAATACTTCCTG
ATATGCCGAGAGCTTGGTGATGCCCCACGCTGGCCCGGCAATTTGCAGAG
CTACCACCGCGTCGAGAAGCAGTCGTCCGCCCCGGGAATTGCCAATCTTA
CTGTCTGGGCTGCCACCCAGCCCCACTGCAAGAATGAGGTCTTTAACCAT
GATGACGGGGATGTGATCGTCTGGAAGTTCCTTTGGCATTTGCTAGCCAG
CTACTTCCAGGCCCCGATGGACAAGTTCGAGGCCCCTACCGAGACAACAC
AATCATTTGATCTGGCCGAGTGGGCTCAAGACAAGAAGCCTGTCTGGGAG
CGCATTGTCACCAAGTATGGCGGCGATCCAGAGGCGTTCCAGCTGGATGC
CTTCAGGCTGATGAACTGGTATATCACACCCGCGCCGAATATGGTTCCCT
TTATCAGTACGGTCGCCAAAGCACGTCACTTTGGCTGGAACCACGGCGAT
GATACCTACCAGTCGTGGCTTAACACCATGCGTGCTTACGAGAATGCTGG
TGTGCTGCCGATTCTCCCATAACATTATGGGTTCCAATTCAGGGACATTA
CAACCCCCATGTTGGAGAATATTCCTCGCTACGAAGGCCCTGAAAACATC
TTCTACTACGAGCAGGAAGATGACCTCTTTGCTGTTCAAAGACGCCGCAA
CACCTGGAGCTACAACATCATCCGCCCTATGGCCATCATTGGCTACAGTT
GCCAATGACGGAGATCATCATCACGTCGAGAAGCCCTATCAAGACCGTCT
ACACCGACCCAAGGGTGCGATTTGTCGCCATCGACTTCCTTGAGCCGGCC
GAAGCTATCGTCGAGAAGCTCAAGGAGCTCTGTAAGGACGTGACCCATGC
TTTTTATACCTCGTACATCCACAACAATGACTTTTCGCAACTGTACAAGA
AGAATGGTCCCCTTTTCCGTACCTTTATCGAAGCGGTGGATTTTGCCTGC
CCCAAGTTGCAGCGTGTGGTGTTACAAACTGGAGGCAAGATGAACAGCAT
CTACGGCATTCGGCCCTTGACCGGCAAAGTTGCCTTCGTTACCGGTGCAA
ACGGCATCAGTGGTAGCGCCATTGTCGACTATCTGGTTAAGCAGCCAGCC
AATGAGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002623KYF_002623Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002623-T1KYF_002623-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002623-T1.cdsKYF_002623-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002623-T1.exon4KYF_002623-T1.exon4Aspergillus niger KYF3exon
KYF_002623-T1.exon3KYF_002623-T1.exon3Aspergillus niger KYF3exon
KYF_002623-T1.exon2KYF_002623-T1.exon2Aspergillus niger KYF3exon
KYF_002623-T1.exon1KYF_002623-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3974874..3976220 -