You are here

Home

KYF_002624-T1, KYF_002624-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002624-T1
Unique NameKYF_002624-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3977783..3979428+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002624-T1 ID=KYF_002624-T1|Name=KYF_002624-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1646bp|location=Sequence derived from alignment at ch2:3977783..3979428+ (Aspergillus niger KYF3)
ATGGAACACGGACTGCCCACTGATGCAGCAACTTATGTCCTTTCTTTTGG
GCGAGGTAGACCACATCCCCCGCTGCTACCGAATCGCGAGGACTATGTTG
TCGACTTTGACGGACCAGATGACCCAGCCTTTCCTCAGAACTGGCCGATG
CGCGTAAGGTAGGACAGCCCCTTGTCCAACCTCTCCGCGCTGCAACTGAC
AGACCGTATTCCCTGACTATTAAGGCTCTACATCAGTGTTATCCTTGCAT
TCACCTGCATCAGCTCGACCTTTGACTCCGCCGTTTTTAGCCCGTCTATG
AGCGCGGTGGCCAAGGAATTCGATGTCAGTATCGAAGTGGCGGCTTTAGC
GAGCTCAGTCTACATTGCGGGTTATGCGTTTGGCCCTCTAATTTGGGCTC
CTCTGTCTGAGCGCCACGGCCGCCGACTCCCTATCATCGTGGCTATGCTG
GGCTTCGGTATCTTTAATACGGCTGTTGCTGTGTCCAAAGACCTTCAGAC
TTTGATAATTTGTCGCTTCTTCTGTGGTGTATTTGGTAGCAGCCCGCTCA
TCAATGTTGCGGCTATCTTCGCTGACATGTATGACAATCGGACACGTGGG
ATCGCTATTGCCCTATTTGCTAATACTGTCTTCCTGGGCCCTCTGGTTGC
ATCCTGTGTTGGCGGGTTCATTAACAAGTCATATCTTGGCTGGAGATGGA
CTGCTTATATACCCTCATTCATGGGATACACAACGTGTTTGCTCAATCTG
CTCTTCCTCAGGGAAACTTATGCGCCGGCAATTCTAACTTCAAAGGCAAC
CAGAATGCGTCAAATCACTGGAAATTGGGGGATCCATTCCAGACAGGAGC
AGATCGAACTTAACCTACATGATCTGGTCATTAACAATCTGGGCCGGCCC
CTGCAAATGCTTTTCAAAGAGCCGCTGATTATGGCTGTCACAGTCTACCT
CAGCTTTGTTTATGGCTTACTCTACTGCTTTCTATCCGCTTACAGTAGCA
TCTTCCAAGGCGTCTATGCCATGTCTGCCGGTGTCAGCGGGCTTCCGATG
CTGTCCAACGTCGTGGGTCTGCTCGGCGCAACAGCTTACATGATTTACGT
GAATAAGAACTACAACACCAAGCTAAAGGCCAACAACAATATCCCCATTC
CGGAGTGGCGACTGCCGCCAGTGATTGTGGGCGGCGTCCTCTTTTCCGCG
GGGCTTTTCTGGCTCGGCTGGACTGGATTCACGCGCACCATTCATTGGAT
TGTCCCAACACTGAGCGGCCTCTTCACAGGAGCCGGTTTGCTCATGATCT
TCATTCAGCTGTTTAACTACCTCATTGATACATATCTCGCTTAGTGAGTA
CCATCCAAATCCTCCATGATTTGGATAGCTTTCTCCCTTTCTCTTTTGTC
GGTGACCCTCTGACCCGCTACAGCGCTGCCTCTGCGTTAGCAGCAAACAC
CTTCTGCCGCTCGCTCGTGGCAGCAGGGTTTCCGCTCTTTTCACGGCAGA
TGTTTGGCAATATGGGTATCCAGTGGGCTGGCACGCTGTTGGGCTGTTTG
GCTGTGGCCTTGGTACCAATACCTCTGGCATTTCTGCGTTATGGCAAGCG
TCTGCGGTTAAGAAGTCAGTTTGCCCCAGTACTGGACAAGGAGTAG
back to top

Coding sequence (CDS) from alignment at ch2:3977783..3979428+

>KYF_002624-T1 ID=KYF_002624-T1|Name=KYF_002624-T1|organism=Aspergillus niger KYF3|type=CDS|length=4500bp|location=Sequence derived from alignment at ch2:3977783..3979428+ (Aspergillus niger KYF3)
ATGGAACACGGACTGCCCACTGATGCAGCAACTTATGTCCTTTCTTTTGG
GCGAGGTAGACCACATCCCCCGCTGCTACCGAATCGCGAGGACTATGTTG
TCGACTTTGACGGACCAGATGACCCAGCCTTTCCTCAGAACTGGCCGATG
CGCGTAAGGCTCTACATCAGTGTTATCCTTGCATTCACCTGCATCAGCTC
GACCTTTGACTCCGCCGTTTTTAGCCCGTCTATGAGCGCGGTGGCCAAGG
AATTCGATGTCAGTATCGAAGTGGCGGCTTTAGCGAGCTCAGTCTACATT
GCGGGTTATGCGTTTGGCCCTCTAATTTGGGCTCCTCTGTCTGAGCGCCA
CGGCCGCCGACTCCCTATCATCGTGGCTATGCTGGGCTTCGGTATCTTTA
ATACGGCTGTTGCTGTGTCCAAAGACCTTCAGACTTTGATAATTTGTCGC
TTCTTCTGTGGTGTATTTGGTAGCAGCCCGCTCATCAATGTTGCGGCTAT
CTTCGCTGACATGTATGACAATCGGACACGTGGGATCGCTATTGCCCTAT
TTGCTAATACTGTCTTCCTGGGCCCTCTGGTTGCATCCTGTGTTGGCGGG
TTCATTAACAAGTCATATCTTGGCTGGAGATGGACTGCTTATATACCCTC
ATTCATGGGATACACAACGTGTTTGCTCAATCTGCTCTTCCTCAGGGAAA
CTTATGCGCCGGCAATTCTAACTTCAAAGGCAACCAGAATGCGTCAAATC
ACTGGAAATTGGGGGATCCATTCCAGACAGGAGCAGATCGAACTTAACCT
ACATGATCTGGTCATTAACAATCTGGGCCGGCCCCTGCAAATGCTTTTCA
AAGAGCCGCTGATTATGGCTGTCACAGTCTACCTCAGCTTTGTTTATGGC
TTACTCTACTGCTTTCTATCCGCTTACAGTAGCATCTTCCAAGGCGTCTA
TGCCATGTCTGCCGGTGTCAGCGGGCTTCCGATGCTGTCCAACGTCGTGG
GTCTGCTCGGCGCAACAGCTTACATGATTTACGTGAATAAGAACTACAAC
ACCAAGCTAAAGGCCAACAACAATATCCCCATTCCGGAGTGGCGACTGCC
GCCAGTGATTGTGGGCGGCGTCCTCTTTTCCGCGGGGCTTTTCTGGCTCG
GCTGGACTGGATTCACGCGCACCATTCATTGGATTGTCCCAACACTGAGC
GGCCTCTTCACAGGAGCCGGTTTGCTCATGATCTTCATTCAGCTGTTTAA
CTACCTCATTGATACATATCTCGCTTACGCTGCCTCTGCGTTAGCAGCAA
ACACCTTCTGCCGCTCGCTCGTGGCAGCAGGGTTTCCGCTCTTTTCACGG
CAGATGTTTGGCAATATGGGTATCCAGTGGGCTGGCACGCTGTTGGGCTG
TTTGGCTGTGGCCTTGGTACCAATACCTCTGGCATTTCTGCGTTATGGCA
AGCGTCTGCGGTTAAGAAGTCAGTTTGCCCCAGTACTGGACAAGGAGTAG
ATGGAACACGGACTGCCCACTGATGCAGCAACTTATGTCCTTTCTTTTGG
GCGAGGTAGACCACATCCCCCGCTGCTACCGAATCGCGAGGACTATGTTG
TCGACTTTGACGGACCAGATGACCCAGCCTTTCCTCAGAACTGGCCGATG
CGCGTAAGGCTCTACATCAGTGTTATCCTTGCATTCACCTGCATCAGCTC
GACCTTTGACTCCGCCGTTTTTAGCCCGTCTATGAGCGCGGTGGCCAAGG
AATTCGATGTCAGTATCGAAGTGGCGGCTTTAGCGAGCTCAGTCTACATT
GCGGGTTATGCGTTTGGCCCTCTAATTTGGGCTCCTCTGTCTGAGCGCCA
CGGCCGCCGACTCCCTATCATCGTGGCTATGCTGGGCTTCGGTATCTTTA
ATACGGCTGTTGCTGTGTCCAAAGACCTTCAGACTTTGATAATTTGTCGC
TTCTTCTGTGGTGTATTTGGTAGCAGCCCGCTCATCAATGTTGCGGCTAT
CTTCGCTGACATGTATGACAATCGGACACGTGGGATCGCTATTGCCCTAT
TTGCTAATACTGTCTTCCTGGGCCCTCTGGTTGCATCCTGTGTTGGCGGG
TTCATTAACAAGTCATATCTTGGCTGGAGATGGACTGCTTATATACCCTC
ATTCATGGGATACACAACGTGTTTGCTCAATCTGCTCTTCCTCAGGGAAA
CTTATGCGCCGGCAATTCTAACTTCAAAGGCAACCAGAATGCGTCAAATC
ACTGGAAATTGGGGGATCCATTCCAGACAGGAGCAGATCGAACTTAACCT
ACATGATCTGGTCATTAACAATCTGGGCCGGCCCCTGCAAATGCTTTTCA
AAGAGCCGCTGATTATGGCTGTCACAGTCTACCTCAGCTTTGTTTATGGC
TTACTCTACTGCTTTCTATCCGCTTACAGTAGCATCTTCCAAGGCGTCTA
TGCCATGTCTGCCGGTGTCAGCGGGCTTCCGATGCTGTCCAACGTCGTGG
GTCTGCTCGGCGCAACAGCTTACATGATTTACGTGAATAAGAACTACAAC
ACCAAGCTAAAGGCCAACAACAATATCCCCATTCCGGAGTGGCGACTGCC
GCCAGTGATTGTGGGCGGCGTCCTCTTTTCCGCGGGGCTTTTCTGGCTCG
GCTGGACTGGATTCACGCGCACCATTCATTGGATTGTCCCAACACTGAGC
GGCCTCTTCACAGGAGCCGGTTTGCTCATGATCTTCATTCAGCTGTTTAA
CTACCTCATTGATACATATCTCGCTTACGCTGCCTCTGCGTTAGCAGCAA
ACACCTTCTGCCGCTCGCTCGTGGCAGCAGGGTTTCCGCTCTTTTCACGG
CAGATGTTTGGCAATATGGGTATCCAGTGGGCTGGCACGCTGTTGGGCTG
TTTGGCTGTGGCCTTGGTACCAATACCTCTGGCATTTCTGCGTTATGGCA
AGCGTCTGCGGTTAAGAAGTCAGTTTGCCCCAGTACTGGACAAGGAGTAG
ATGGAACACGGACTGCCCACTGATGCAGCAACTTATGTCCTTTCTTTTGG
GCGAGGTAGACCACATCCCCCGCTGCTACCGAATCGCGAGGACTATGTTG
TCGACTTTGACGGACCAGATGACCCAGCCTTTCCTCAGAACTGGCCGATG
CGCGTAAGGCTCTACATCAGTGTTATCCTTGCATTCACCTGCATCAGCTC
GACCTTTGACTCCGCCGTTTTTAGCCCGTCTATGAGCGCGGTGGCCAAGG
AATTCGATGTCAGTATCGAAGTGGCGGCTTTAGCGAGCTCAGTCTACATT
GCGGGTTATGCGTTTGGCCCTCTAATTTGGGCTCCTCTGTCTGAGCGCCA
CGGCCGCCGACTCCCTATCATCGTGGCTATGCTGGGCTTCGGTATCTTTA
ATACGGCTGTTGCTGTGTCCAAAGACCTTCAGACTTTGATAATTTGTCGC
TTCTTCTGTGGTGTATTTGGTAGCAGCCCGCTCATCAATGTTGCGGCTAT
CTTCGCTGACATGTATGACAATCGGACACGTGGGATCGCTATTGCCCTAT
TTGCTAATACTGTCTTCCTGGGCCCTCTGGTTGCATCCTGTGTTGGCGGG
TTCATTAACAAGTCATATCTTGGCTGGAGATGGACTGCTTATATACCCTC
ATTCATGGGATACACAACGTGTTTGCTCAATCTGCTCTTCCTCAGGGAAA
CTTATGCGCCGGCAATTCTAACTTCAAAGGCAACCAGAATGCGTCAAATC
ACTGGAAATTGGGGGATCCATTCCAGACAGGAGCAGATCGAACTTAACCT
ACATGATCTGGTCATTAACAATCTGGGCCGGCCCCTGCAAATGCTTTTCA
AAGAGCCGCTGATTATGGCTGTCACAGTCTACCTCAGCTTTGTTTATGGC
TTACTCTACTGCTTTCTATCCGCTTACAGTAGCATCTTCCAAGGCGTCTA
TGCCATGTCTGCCGGTGTCAGCGGGCTTCCGATGCTGTCCAACGTCGTGG
GTCTGCTCGGCGCAACAGCTTACATGATTTACGTGAATAAGAACTACAAC
ACCAAGCTAAAGGCCAACAACAATATCCCCATTCCGGAGTGGCGACTGCC
GCCAGTGATTGTGGGCGGCGTCCTCTTTTCCGCGGGGCTTTTCTGGCTCG
GCTGGACTGGATTCACGCGCACCATTCATTGGATTGTCCCAACACTGAGC
GGCCTCTTCACAGGAGCCGGTTTGCTCATGATCTTCATTCAGCTGTTTAA
CTACCTCATTGATACATATCTCGCTTACGCTGCCTCTGCGTTAGCAGCAA
ACACCTTCTGCCGCTCGCTCGTGGCAGCAGGGTTTCCGCTCTTTTCACGG
CAGATGTTTGGCAATATGGGTATCCAGTGGGCTGGCACGCTGTTGGGCTG
TTTGGCTGTGGCCTTGGTACCAATACCTCTGGCATTTCTGCGTTATGGCA
AGCGTCTGCGGTTAAGAAGTCAGTTTGCCCCAGTACTGGACAAGGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002624KYF_002624Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002624-T1.exon1KYF_002624-T1.exon1Aspergillus niger KYF3exon
KYF_002624-T1.exon2KYF_002624-T1.exon2Aspergillus niger KYF3exon
KYF_002624-T1.exon3KYF_002624-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002624-T1.cdsKYF_002624-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002624-T1KYF_002624-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3977783..3979428 +
Powered by Drupal