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KYF_002693-T1, KYF_002693-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002693-T1
Unique NameKYF_002693-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:4147808..4149054-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002693-T1 ID=KYF_002693-T1|Name=KYF_002693-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1247bp|location=Sequence derived from alignment at ch2:4147808..4149054- (Aspergillus niger KYF3)
ATGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGC
TCCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGTTTGTTCACCATCG
ATTGATTTCATCTTGGGAGAAACGTGGCAGGCAGGCATATGTGATCTTTT
CGCATTGTTGTTGTCGATCATGTTGGAACTTGCTTCTTGTGACGGAGAAC
CTTGTTCTTGTCCCAGAGCATATCAGGTTTTCCAATATGAGCGACTCGAC
TCGCGTGCCGGAACTGCGGTTATCCCTTCACGGAAAAAAGGAACATGTCG
CTAATCTTTGCACGTTCTATAGGCGGTCTTGGTGCCGGTGGTCGTGGTCG
CGGCGGTGGCCGTGGTGCTCCCCGCGGTGGTCGTGGTGCCCCCCGTGGCC
GTGGTGGTCCTCGCGGCGGTGGTCGCGGCGGTGCTAAGGGTGCCAAGGGT
GGTGCTAAGGTCATCATTGTAGGTGTTTCCTGTTAAATCGATCGAGAAGA
GAGACGTTGTATGGAGTCTAACCGGGTTTCGTCTAGGAACCCCACCGTCA
CGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCGTCACCA
AGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATCTCTGTT
GAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATACCGTGT
CTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTGGTCTGG
ATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGTTCCGCC
AGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTACTGGTAA
CGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGATCGGCA
TGGCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCCAGACAC
CCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTCGCCGA
TGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCCACATGT
TCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATC
GACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCAGAAGAT
GAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGCCTTTCG
AACGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCATGA
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Coding sequence (CDS) from alignment at ch2:4147808..4149054-

>KYF_002693-T1 ID=KYF_002693-T1|Name=KYF_002693-T1|organism=Aspergillus niger KYF3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch2:4147808..4149054- (Aspergillus niger KYF3)
GAACCCCACCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGA
TTTGCTCGTCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGA
AGCGCATCTCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAG
ACCGAATACCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTAT
CCTGGGTGGTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGT
ATCTCGGTTCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTC
GGACCTACTGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCG
TGACTTGATCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCG
AGGACGCCAGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGAT
GTCATCTTCGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCT
GAACGCCCACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCA
AGGCCAACTGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGT
GAAGTCCAGAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGAC
CCTGGAGCCTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGC
GCTCTGCATGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCC
GTGGTGCTCCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCT
CGCGGCGGTGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGT
CATCATTATGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCC
GTGGTGCTCCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCA
CCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCG
TCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATC
TCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATA
CCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTG
GTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGT
TCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTAC
TGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGA
TCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCC
AGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTT
CGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCC
ACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAAC
TGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCA
GAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGC
CTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCA
TGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCT
CCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGG
TGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTA
TGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCT
CCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCACCGTCACG
CTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCGTCACCAAG
AACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATCTCTGTTGA
GTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATACCGTGTCT
GGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTGGTCTGGAT
GACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGTTCCGCCAG
CGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTACTGGTAACG
TCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGATCGGCATG
GCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCCAGACACCC
TCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTCGCCGATG
TTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCCACATGTTC
CTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATCGA
CAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCAGAAGATGA
GAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGCCTTTCGAA
CGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCATGAGCGGT
CTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCTCCCCGCGG
TGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGGTGGTCGCG
GCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTATGGCATTC
GGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCTCCTCGTGG
AGGTGGTGGCGGCCGTGGTGGTAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP1KYF_002693Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002693-T1KYF_002693-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002693-T1.cdsKYF_002693-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002693-T1.exon3KYF_002693-T1.exon3Aspergillus niger KYF3exon
KYF_002693-T1.exon2KYF_002693-T1.exon2Aspergillus niger KYF3exon
KYF_002693-T1.exon1KYF_002693-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG092648VW
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR000692
DBxrefPFAM:PF01269
ProductSmall subunit processome complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:4147808..4149054 -
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