You are here

Home

KYF_002765-T1, KYF_002765-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002765-T1
Unique NameKYF_002765-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:4396325..4398881+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002765-T1 ID=KYF_002765-T1|Name=KYF_002765-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2557bp|location=Sequence derived from alignment at ch2:4396325..4398881+ (Aspergillus niger KYF3)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCG
AGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAG
AGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGT
GAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGG
GAAAAAATGCCCCTGTTCAGGAGGAAGAGGATGAGGAGGAAGAGGAGGAA
GAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGA
TGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTA
ATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGAT
GATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAA
GCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATG
ATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTG
CTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGA
GAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGG
CTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCT
GCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATAT
TGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAG
AGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAG
TCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCG
TCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCA
TTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGT
AGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCT
CGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCA
TTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACA
AAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTT
CAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATCA
TCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTC
ACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGACCGCATGCT
CGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCA
AGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGAC
AAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGC
CAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCC
CCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAG
ATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCA
CCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCC
ACGGTAGCATGAGCCAAGAACAGGTATGTTATTTTACATCGACTTTCATT
TTCTTCAATACGATCGATGATACTAATCGTGGGGTTTTCCAAACTACAGC
GTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTG
GCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGGT
CATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTTG
GTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGCC
GAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCA
AGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCCT
GGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTCG
GAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCAA
GGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAGC
GTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGGC
GCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGCA
GAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGCC
AGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCATG
AAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAGGGCAA
GAAATGA
back to top

Coding sequence (CDS) from alignment at ch2:4396325..4398881+

>KYF_002765-T1 ID=KYF_002765-T1|Name=KYF_002765-T1|organism=Aspergillus niger KYF3|type=CDS|length=4962bp|location=Sequence derived from alignment at ch2:4396325..4398881+ (Aspergillus niger KYF3)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCG
AGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAG
AGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGT
GAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGG
GAAAAAATGCCCCTGTTCAGGAGGAAGAGGATGAGGAGGAAGAGGAGGAA
GAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGA
TGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTA
ATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGAT
GATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAA
GCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATG
ATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTG
CTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGA
GAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGG
CTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCT
GCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATAT
TGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAG
AGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAG
TCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCG
TCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCA
TTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGT
AGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCT
CGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCA
TTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACA
AAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTT
CAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATCA
TCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTC
ACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGACCGCATGCT
CGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCA
AGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGAC
AAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGC
CAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCC
CCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAG
ATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCA
CCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCC
ACGGTAGCATGAGCCAAGAACAGCGTATCAAGAGTGTCGAGAATTTCCGT
GAGGGCAAGGCGGCGTTCCTGCTGGCTACGGATCTGGCGTCGCGTGGTCT
GGATATCAAGGGCGTTGAGACGGTCATCAACTACGAAGCGCCGCAGAGCC
ATGAGATCTACCTGCATCGTGTTGGTCGTACTGCGCGTGCGGGCCGCTCC
GGTCGGGCCTGCACCATTGCCGCCGAGCCTGACCGCAAGGTGGTCAAGGC
GGCGGTGAAGGCGGGCAAGTCGCAAGGAGCCAAGATTGCCAGCCGTGTGA
TTGAACCGGCGGTGGCGGATTCCTGGGCGGCCAAGGCGGAGGAGTTGGCG
GACGAGGTGGAAGAGGTGTTGTCGGAGGAGAAGCTCGAGAAGCAGCTGGC
ACAGGCGGAGATGCAAGTGACCAAGGGAGAGAACCTGATCAAGCACGAGG
CGGAGATCAAGTCGCGGCCGAAGCGTACTTGGTTCGAGACGGAGCGCGAC
AAGAAGGCGGCGCGGAAGCTGGGCGCGGCGGAGCTCAACGGGCCCGATGC
CGGCATGTCCAAGAAGGAGAAGCAGAAGCTCAGCAACAAGGACAAGAAGC
GTCTGGATGATTCCCGTCAGCGCCAGGAAGCGGGTGCTGGTTGGAAGAAG
GGCCGGGCAACACGGGAGAGCATGAAGAATGGGCAATTGCCCAAAGCTAA
GAAGGACAACAAGAAGAAGGGCAAGAAATGAATGGCCGGAACGAAAAAGC
GCGCGAACGCCGACGACGACTTCGTGCTCACATTGTCGGACGATGAGAAT
GACACGTTAAATCAGCTCGAAGAGGAGGGCGAGGGCGACGATGGTGCGCT
AGCCACGGGATCGAAAACGAAGAAGCGCAAGAGAGATGATGCTGCGGCGG
CGCAGCAGGAGAAGGGGAAGAACAAGAAGGTGAAGAAGCAGGAACAACAG
CAACAACAAGCACAACAGAAGAAAAAGAAGGGAAAAAATGCCCCTGTTCA
GGAGGAAGAGGATGAGGAGGAAGAGGAGGAAGAGGATCAGGGTGAAGATG
ATGGCGCGCTTAATTCGGATTTCGAGTTCGATGTCGGCGGTGCTGCGAAT
GAGGTTAGGGATTTCGATGGGTGGGAGGTTAATGGTAATGAGGAGGGTAA
GGGTGGGGATAAGAAGGCTGTGGATATCGATGATATTATTTCGAGGAGGC
AGGCGAAGAAGGAGGCTGAGTTGATTCGCAAGCAGAAGAAGAAGCAGAAG
CAAGAGGAGGAGTTTAGTGAATTGGAGGATGATGATGAGGAGGATGGTGG
TATGGAGGTCGACTTTGGGGATGATGAGCTGCTTGCGGAGGATGGGTTCG
GTATGGGTGTCGATGGGGAGGAGGAGAGCGAGAAGTCCGATGCGGAGGAT
GAGGAGAAGGAAGAAGGGTCTGATGAGGAGGCTGAGGGCAGTGATGAAGA
CGAGCAGATGGATGAGGATGATGACGATGCTGCTTCGGATGACGACTCGG
TTGCTACTCCTGTCATGCACCCGGATGATATTGCCTCTGATCGGGACTCG
GACGAGGAGAGTCAGGTCGACGCCGAGGAAGAGGAGAAGCGCAAGGCTTT
CTTCGCGCCCGAGGAGGAAAAGACTTCCGAGTCTGCTATGGCAGATGCGA
AGCGGTCGTTCCAGGAATTCAACCTCTCTCGTCCCATCCTTCGTGGTCTC
GCCGGAGTCAACTTCTCGAACCCTACACCCATTCAGCGCAAGACGATCCC
CGTGGCTCTCCTGGGCAAGGATATTGTCGGTAGTGCCGTTACTGGTTCCG
GAAAGACTGCCGCCTTCGTTGTCCCGATTCTCGAACGTCTGCTGTTCCGG
CCGCGCAAGGTCCCGACGAGTCGTGTTGCCATTCTCATGCCCACCCGTGA
ATTGGCGGTGCAGTGCTACAATGTCGCTACAAAGCTGGCCACATACACGG
ACATCACCTTCTGTCAGCTGGTCGGTGGTTTCAGTCTTCGCGAGCAGGAG
AACATCTTGAAGAAGCGTCCCGATGTGATCATCGCCACCCCCGGTCGTTT
CATTGATCACATGCGCAACTCGGCCAGCTTCACCGTTGATACTCTGGAAA
TCCTGGTTCTGGATGAAGCCGACCGCATGCTCGAGGACGGTTTCGCCGAC
GAGTTGAACGAGATTCTCACTACGATCCCCAAGTCGCGCCAGACCATGCT
TTTCTCGGCTACGATGACGGACACTGTCGACAAGCTCATTCGCGTCGGTC
TCAACCGCCCCGTGCGCTTGATGGTCGACGCCAAGAAGAACACGGCCGTG
ACACTGGTGCAGGAATTCGTGCGTCTGCGCCCCGGACGTGAGGACAAGCG
ACTAGGCTACCTTCTCTACCTCTGCAAAGAGATCTACACCGGTCGGGTGA
TTGTCTTCTTCCGACAGAAGAAGGAGGCGCACCGGGTGCGTATCATCTTC
GGACTGCTGGGCTTGAAGGCTGCCGAGCTCCACGGTAGCATGAGCCAAGA
ACAGCGTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCC
TGCTGGCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAG
ACGGTCATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCG
TGTTGGTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTG
CCGCCGAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAG
TCGCAAGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGA
TTCCTGGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGT
TGTCGGAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTG
ACCAAGGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCC
GAAGCGTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGC
TGGGCGCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAG
AAGCAGAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCA
GCGCCAGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGA
GCATGAAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAG
GGCAAGAAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DRS1KYF_002765Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002765-T1.exon1KYF_002765-T1.exon1Aspergillus niger KYF3exon
KYF_002765-T1.exon2KYF_002765-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002765-T1.cdsKYF_002765-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002765-T1KYF_002765-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_2.12
NoteSMCOG1122:ATP-dependent RNA helicase
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Productnucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:4396325..4398881 +
Powered by Drupal