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KYF_002768-T1, KYF_002768-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002768-T1
Unique NameKYF_002768-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:4411854..4412829+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002768-T1 ID=KYF_002768-T1|Name=KYF_002768-T1|organism=Aspergillus niger KYF3|type=mRNA|length=976bp|location=Sequence derived from alignment at ch2:4411854..4412829+ (Aspergillus niger KYF3)
ATGTCTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCA
GGTCCTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTTCA
ACAAGTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGACGTAG
GTGCTTCCCAATCCATCGCGATTTTGATTGTTCTACGAGCATGGGTTTAT
GTCGACCGGTGGAAAAAACGCCATTATCTGTTGGAAGACAGTGGACTCGG
CATGCAGGGAGGAAAACGCACGACAATTCGGGATATCTGCGAAGGGAATC
ACGATGGAAAATTTTTTTGCGAAATGGCACAGAAACGAGATATGCTGACT
CGGCTTCATGTTCAATAGCGACTACGTCCAGATCCGCTCCCCTGTCTACC
TTCCTCACTCCGCTGGCCGTTATGCCGCCAAGCGTTTCCGCAAGGCTCAG
TGCCCCATCATCGAGCGCCTGACCAACTCCCTCATGATGAACGGCCGCAA
CAACGGAAAGAAGCTCATGGCTGTCCGCATCGTTGCCCACGCCTTCGAGA
TCGTACGTCACCTATTTTCTGCCCCCATTGCCTTCCGTACGCAGAACGGC
TAGGGTCCGCAAAATCCCAGAACCAGACGCAGAAAGCTGACCGGGTAATC
TTTTCTAGATCCACATCATGACCGACCAGAACCCTCTCCAGGTCGCCGTT
GACGCCATTGTCAACTGCGGTCCTCGCGAAGACAGCACCCGTATCGGTTC
CGCTGGTACCGTCCGTCGTCAGGCCGTCGATGTGTCTCCTCTCCGCCGTG
TCAACCAGGCCATTGCCCTCCTGACCATCGGTGCTCGCGAGGCCTCTTTC
CGTAACATCAAGAGCATTGCTGAGTGCCTGGCTGAAGAGCTCATCAACGC
CGCCAAGGGTTCCTCCAACTCCTATGCCATCAAGAAGAAGGACGAGCTCG
AGCGTGTTGCCAAGTCCAACCGGTAA
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Coding sequence (CDS) from alignment at ch2:4411854..4412829+

>KYF_002768-T1 ID=KYF_002768-T1|Name=KYF_002768-T1|organism=Aspergillus niger KYF3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch2:4411854..4412829+ (Aspergillus niger KYF3)
ATGTCTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCA
GGTCCTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTTCA
ACAAGTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGACCGAC
TACGTCCAGATCCGCTCCCCTGTCTACCTTCCTCACTCCGCTGGCCGTTA
TGCCGCCAAGCGTTTCCGCAAGGCTCAGTGCCCCATCATCGAGCGCCTGA
CCAACTCCCTCATGATGAACGGCCGCAACAACGGAAAGAAGCTCATGGCT
GTCCGCATCGTTGCCCACGCCTTCGAGATCATCCACATCATGACCGACCA
GAACCCTCTCCAGGTCGCCGTTGACGCCATTGTCAACTGCGGTCCTCGCG
AAGACAGCACCCGTATCGGTTCCGCTGGTACCGTCCGTCGTCAGGCCGTC
GATGTGTCTCCTCTCCGCCGTGTCAACCAGGCCATTGCCCTCCTGACCAT
CGGTGCTCGCGAGGCCTCTTTCCGTAACATCAAGAGCATTGCTGAGTGCC
TGGCTGAAGAGCTCATCAACGCCGCCAAGGGTTCCTCCAACTCCTATGCC
ATCAAGAAGAAGGACGAGCTCGAGCGTGTTGCCAAGTCCAACCGGTAAAT
GTCTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCAGG
TCCTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTTCAAC
AAGTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGACCGACTA
CGTCCAGATCCGCTCCCCTGTCTACCTTCCTCACTCCGCTGGCCGTTATG
CCGCCAAGCGTTTCCGCAAGGCTCAGTGCCCCATCATCGAGCGCCTGACC
AACTCCCTCATGATGAACGGCCGCAACAACGGAAAGAAGCTCATGGCTGT
CCGCATCGTTGCCCACGCCTTCGAGATCATCCACATCATGACCGACCAGA
ACCCTCTCCAGGTCGCCGTTGACGCCATTGTCAACTGCGGTCCTCGCGAA
GACAGCACCCGTATCGGTTCCGCTGGTACCGTCCGTCGTCAGGCCGTCGA
TGTGTCTCCTCTCCGCCGTGTCAACCAGGCCATTGCCCTCCTGACCATCG
GTGCTCGCGAGGCCTCTTTCCGTAACATCAAGAGCATTGCTGAGTGCCTG
GCTGAAGAGCTCATCAACGCCGCCAAGGGTTCCTCCAACTCCTATGCCAT
CAAGAAGAAGGACGAGCTCGAGCGTGTTGCCAAGTCCAACCGGTAAATGT
CTGAACACGGCGAAGTCGAGGTCGAAAACCCCGCTGCGGCCTTCCAGGTC
CTGCCCAAGGAGGCTATCGCGGAGATGGGATCCGTGAAGCTGTTCAACAA
GTGGAGCTACGAGGATGTTGAGATCAGGGACATCTCCTTGACCGACTACG
TCCAGATCCGCTCCCCTGTCTACCTTCCTCACTCCGCTGGCCGTTATGCC
GCCAAGCGTTTCCGCAAGGCTCAGTGCCCCATCATCGAGCGCCTGACCAA
CTCCCTCATGATGAACGGCCGCAACAACGGAAAGAAGCTCATGGCTGTCC
GCATCGTTGCCCACGCCTTCGAGATCATCCACATCATGACCGACCAGAAC
CCTCTCCAGGTCGCCGTTGACGCCATTGTCAACTGCGGTCCTCGCGAAGA
CAGCACCCGTATCGGTTCCGCTGGTACCGTCCGTCGTCAGGCCGTCGATG
TGTCTCCTCTCCGCCGTGTCAACCAGGCCATTGCCCTCCTGACCATCGGT
GCTCGCGAGGCCTCTTTCCGTAACATCAAGAGCATTGCTGAGTGCCTGGC
TGAAGAGCTCATCAACGCCGCCAAGGGTTCCTCCAACTCCTATGCCATCA
AGAAGAAGGACGAGCTCGAGCGTGTTGCCAAGTCCAACCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS5KYF_002768Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002768-T1.exon1KYF_002768-T1.exon1Aspergillus niger KYF3exon
KYF_002768-T1.exon2KYF_002768-T1.exon2Aspergillus niger KYF3exon
KYF_002768-T1.exon3KYF_002768-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002768-T1.cdsKYF_002768-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002768-T1KYF_002768-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_2.12
DBxrefInterPro:IPR020606
DBxrefInterPro:IPR023798
DBxrefInterPro:IPR036823
DBxrefInterPro:IPR000235
DBxrefInterPro:IPR005716
DBxrefPFAM:PF00177
Productribosomal protein S5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:4411854..4412829 +
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