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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:4429499..4430428+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002775-T1 ID=KYF_002775-T1|Name=KYF_002775-T1|organism=Aspergillus niger KYF3|type=mRNA|length=930bp|location=Sequence derived from alignment at ch2:4429499..4430428+ (Aspergillus niger KYF3)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTATTGCG
ACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGT
ATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCT
GTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGT
CTTCCTTAGCTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTC
TTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGG
CGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACC
GACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCAGTCCCCACG
GATCCCTTGCTTGATTTCCACTCGTCTTGGGCTAATGATGGACATAGACT
ATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAA
AATCCTTCCAGACAGCGCAAGGACCGATAA back to topCoding sequence (CDS) from alignment at ch2:4429499..4430428+ >KYF_002775-T1 ID=KYF_002775-T1|Name=KYF_002775-T1|organism=Aspergillus niger KYF3|type=CDS|length=2796bp|location=Sequence derived from alignment at ch2:4429499..4430428+ (Aspergillus niger KYF3)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATT
TTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATAC
CCTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCT
GTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG
CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTA
TGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCC
CGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG
ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGA
GGCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAA
TGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAAT
GCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCT
CACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCC
TGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATT
CTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTT
TATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAAC
TATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACC
CTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTG
TTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGC
TGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTAT
GCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCC
GGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGA
TTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAG
GCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAAT
GACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATG
CTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTC
ACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCT
GAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTC
TGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTT
ATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACT
ATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCC
TCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGT
TTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCT
GCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATG
CGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCG
GAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGAT
TGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGG
CCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAATG
ACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGC
TCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCA
CTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCTG
AGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCT
GTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTA
TGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTA
TGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCT
CGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGTT
TTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCTG
CAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGC
GACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGG
AGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATT
GTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGC
CCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047750 | cholestenol delta-isomerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016125 | sterol metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033118 |
| DBxref | InterPro:IPR007905 |
| DBxref | PFAM:PF05241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:4429499..4430428 + |
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