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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:4779294..4780589- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002888-T1 ID=KYF_002888-T1|Name=KYF_002888-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1296bp|location=Sequence derived from alignment at ch2:4779294..4780589- (Aspergillus niger KYF3)
ATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTAAGTTACTGCGCCTCCACGCGCGATTCTTCACATCTC
ACAATGAACAGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTC
GACATTGGTGATAGCACGTACATTACCATCACGGGTGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGGTGAGTATACCGTCCT
TTAAGGTACGGATGTGGACACTGATGGGAACCAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAA
GAGCTCTCAGAACGGTAAGATTTATTCCATCAAGGTTGTAGTTCGGTGCG
ATCACATACTAAGCGGCGTATAGGAGTCCGCATCAAGACCATCTACGGCG
ACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGAT
ATCACCGACTATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGCAA
ATCCCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGC
AGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCA
GACAGTTGCACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGAA
GACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG back to topCoding sequence (CDS) from alignment at ch2:4779294..4780589- >KYF_002888-T1 ID=KYF_002888-T1|Name=KYF_002888-T1|organism=Aspergillus niger KYF3|type=CDS|length=4548bp|location=Sequence derived from alignment at ch2:4779294..4780589- (Aspergillus niger KYF3)
GAGTCCGCATCAAGACCATCTACGGCGACACTGGATCGGTCAGTGAGGTC
ACCTACAAGGAGATTACCCTGTCCGATATCACCGACTATGGCATTGTGGT
GGAGCAAAACTATGACGATACGAGCAAATCCCCGACCGATGGAATCACCA
TCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGC
ACCAACATCTACATCGTCTGCGGATCAGACAGTTGCACGGACTGGACTTG
GACGGATGTGGATGTGAGTGGAGGGAAGACCAGCTCCGACTGTGAGAATG
TGCCGGACGATATCAGCTGTTAGAACATTTACTTTTCGGGCGGCGTCTGC
TCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGTCGGAGTGACAA
CACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAAGAGCTCTCAGA
ACGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGG
ACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGGGGCCGATG
GCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGC
AACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTC
GTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCAGGTGTTCA
GCATTGACGGGTCGACGTATCTTACCATGGAGGACATCACCATTGACAAC
ACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTCGACATTGG
TGATAGCACGTACATTACCATCACGGGTGCCAATGTATACAACCAAGATG
ACTGTGTGGCGGTGAACTCGGGCGAGATGGTGACTTCTAGCTCGGTGATC
GTCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCC
GCTGGTGACCCCCGCCCCTAAGCTCGAGGATCTGGAGAAGCGCGCAACCT
CCTGCACGTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAG
ACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCAC
CACGTTGGATCTGACCGATCTGAACGACGGGACTCACGAGTCCGCATCAA
GACCATCTACGGCGACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGA
TTACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAAAACTAT
GACGATACGAGCAAATCCCCGACCGATGGAATCACCATCGAAGACTTTGT
CCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACA
TCGTCTGCGGATCAGACAGTTGCACGGACTGGACTTGGACGGATGTGGAT
GTGAGTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATAT
CAGCTGTTAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACG
GGCTGTCGATCGGTTCCGTCGGCGGTCGGAGTGACAACACCGTGAAGAAC
GTGACCTTCTACGACTCGGAGATCAAGAGCTCTCAGAACGGTCATCTTCG
AAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCA
GTCTCCGGAACTGACATCACCGTCACCGGGGCCGATGGCGCCTATCTCAA
CGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAACGGCGGCAAGA
CGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGC
GGGATCTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTC
GACGTATCTTACCATGGAGGACATCACCATTGACAACACGGATGGCGATG
ATGGCGAGGCGGCCAACACCGATGGGTTCGACATTGGTGATAGCACGTAC
ATTACCATCACGGGTGCCAATGTATACAACCAAGATGACTGTGTGGCGGT
GAACTCGGGCGAGATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCT
GGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCC
GCCCCTAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTC
CGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCA
CCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTG
ACCGATCTGAACGACGGGACTCACGAGTCCGCATCAAGACCATCTACGGC
GACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGA
TATCACCGACTATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGCA
AATCCCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTG
CAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATC
AGACAGTTGCACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGA
AGACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAGAAC
ATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGG
TTCCGTCGGCGGTCGGAGTGACAACACCGTGAAGAACGTGACCTTCTACG
ACTCGGAGATCAAGAGCTCTCAGAACGGTCATCTTCGAAGGCGAAACCAC
CTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTG
ACATCACCGTCACCGGGGCCGATGGCGCCTATCTCAACGGTGACGGCAGT
CGTTGGTGGGATGGCGAGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTT
CTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGGATCTACATCC
AGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACC
ATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGCGAGGCGGC
CAACACCGATGGGTTCGACATTGGTGATAGCACGTACATTACCATCACGG
GTGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAG
ATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGAGTCCGCATCAAGACCATCTACGGCGACACTGGATCGG
TCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGATATCACCGACTAT
GGCATTGTGGTGGAGCAAAACTATGACGATACGAGCAAATCCCCGACCGA
TGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGG
AGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCAGACAGTTGCACG
GACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGAAGACCAGCTCCGA
CTGTGAGAATGTGCCGGACGATATCAGCTGTTAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAA
GAGCTCTCAGAACGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAG
GAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCAC
CGGGGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATG
GCGAGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCAT
GATCTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGT
GCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGAGGACATCA
CCATTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGG
TTCGACATTGGTGATAGCACGTACATTACCATCACGGGTGCCAATGTATA
CAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGATGGTGACTTCTA
GCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCC
GTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCGAGGATCTGGAGAA
GCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCA
GCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTG
CCCTCAGGCACCACGTTGGATCTGACCGATCTGAACGACGGGACTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:4779294..4780589 - |
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