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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:4834869..4837275- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002908-T1 ID=KYF_002908-T1|Name=KYF_002908-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2407bp|location=Sequence derived from alignment at ch2:4834869..4837275- (Aspergillus niger KYF3) ATGACGGCCAGCGAGGAAGCCTCCTCCCCCGCCACGCGCGCGCGAAAGAT
CCGAAAGGTGACCCGCGCCTGCGATGCTTGCAAGGCCAAAAAGAAGGCTT
GTACGGGCAACATCCCCTGTGGTCCCTGCTCCCGCCGTCACTTGGCATGC
ACCTACGACTCCGCCTACAATCGAGGTGTGGCGCTCAGCCCTCCTCCCTC
AACATTGCGTCCCAAGAACCATCGTCCACTGCGGGAGCCCGACAGGTCAT
GTAGCAATCCAGATCCGGCCTCAGATGTGATCCAGCCACTGCAGTCGCCC
CCTGCACTTCGTTCAGCCATCGAGTATGTACGGCCAGGCTTGCAGATCAG
CCCTGCATCGGGGCCAGGCATACTCCCCGAGTCTGCTATTGTCGATGCAT
CTGTTCGACGAGGCTCAGTAGACGGGACAGGTCAGTACTGGGGTCCAAGC
TCAGCACATTCATTTCTGGGCAGGGTAGTGGAGGACTTGCATGCCACTCC
CTCCAAATCCATTGCTCCTGCACCAGAGCCCGATGCCTCAGCAACGGTCT
CCATCTTTTCCCACGGTGATCGTGTGGTCCCGGAGGTTCGGCTATCAGAT
TTTGTCTGGCCAGACCAAACCAAGGCCAAAAGTCTGATCCGCCGATATTT
CGAGTTTGCAGCACCGACCTACCGCGTGCTCCATCAGCCTACGCTCCATG
CCATGGTACAACGCCTGTACCAGGAGGGCTCGGAGGGCTATCGGATCGGT
AGCCAGCTCGATGTAGCATCCCAGGCCGTCGTGCTCTTGCTTCTGAGTAC
TGCAGCCATGTTCCGAGTCGACGAAGACGGGCGCATGAGAGACGCCGACG
ACGATGGCTGGCGCAAGAGCGAGCTTTACTACGCACAAGCGGAGCATCTG
CTGTCGCTCGAGACGGGTGCCCCTACTCTGGCATCGGTGCAAGCTCGTTT
CCTGATGGTGCTGTATCTGCTGAGCTCCTCTCGAGCCCAGAAGGCGTGGT
TCGTGTTTGGCACAACAGTCCAGCTGATGATGGCCCTTGGTTTGCACAAT
CGACGGGCGAGGAGGCTCCATGAAGAAGAAGAGGATCTGGTGCAGCAGGA
GTGTCAACGGCGCCTTGTCTGGTGCTCTTACACCCTGGACAAGTATCTCA
GCGTGATCCTTGGTCGACCACGATTGTGGCATGACGAAGACTTGGATGAA
GATCTTCCCACACGCGTCAATGACGAGGACCTGACGATGCGGGAAAGGCG
ATTGACCAGACGTGATTGTGTGATGGACGCGCCGGTCTTTCATGCGGTAT
TGGCACAAATTCTCACCCAGGCAGCCAAAAAACCCTACGTTCTCGCGGGT
CTCTCCGATCAGATGGAGATTGAGACCATCCGAGGCCTGTGTGGTGAGGT
CGCGAAATGGCAAGCGGAACTGCCTCCTTTTCTTTCGGGGGTCATCCAGC
CCAGTAGTTTGGTTCCGGTGTTTCGGCGCCAGCTGACTGTTTTGCAGCTG
GCTCGTTATCATGCCTTGATGTTCATCACGCGACCTCTCTTATTGCGGGA
TTATGGGCAAATGTGGCCTGAGCACCGAAGCAGTTACCGATACCACCTGC
ATCTGTGTCTCACCGCAGCGCGAGAAGCAATCGAATCGATCCTTGGATTT
GTGCGCGAGGATGAATTGTTTCCAGCATTTTGGTACTCACAGTACATCGC
ATTCAATGCTTTGTCCATCATCTATCTATACCTGATCCAGGTCAGACGCA
ACCGTCTGCCATCTGCGAGTCTCGACTTCGTCGCGAGCCCGGAATACGCC
TTGCACACGGATTTGGACGAATCCATGTTGTATAGACTGTCTGAGACGGC
AGTGACACACCTCGCCGACGCAACAGCTCGCAACGCTCCTTCTTGGAAAT
ACAGTGTCATTTTGCAGGGTCTGCGACACGAGCTGGCCCGCCTTGGGCCC
CCAATATTGGAAAATGACGACGCTCACGCTACAGAACCGATTGCGTTATC
CCGTCCAGTTCCCGAATCGATTCCTCGTCCGACCGAACATGGAGGTGAGA
CGGGTCGCCATGAACAGCAGGCAGGGCCCGCCGCAGTCGGAGATTATAAC
CTTGATCCGAACGGGCTGCCGCCCATATTCGCGGGGCTGGACCCCGCTGT
TGATCCAGGGTTGCTCGATCCGAGGACCCAGTCCCTCTTGGACACTTTCG
TTATGGGCGAAAACGTGGTGCTTGACTTCTGGCCACAATTGGAAAGTCTA
CCTATCAGTAAGTCTTATCATGCCGGCGTCGATGAAGGCCATCAATAAGT
GCTAATTGACCCAGCATATCCCGGTTGATATTGGATGTGATACAGGAGCC
GAAGTGCGACTGGGCTCCGACACCGTCAACTACGGGACTTGTGTACACCT
ATCATAA back to topCoding sequence (CDS) from alignment at ch2:4834869..4837275- >KYF_002908-T1 ID=KYF_002908-T1|Name=KYF_002908-T1|organism=Aspergillus niger KYF3|type=CDS|length=4638bp|location=Sequence derived from alignment at ch2:4834869..4837275- (Aspergillus niger KYF3) GAGCCGAAGTGCGACTGGGCTCCGACACCGTCAACTACGGGACTTGTGTA CACCTATCATAAATGACGGCCAGCGAGGAAGCCTCCTCCCCCGCCACGCG CGCGCGAAAGATCCGAAAGGTGACCCGCGCCTGCGATGCTTGCAAGGCCA AAAAGAAGGCTTGTACGGGCAACATCCCCTGTGGTCCCTGCTCCCGCCGT CACTTGGCATGCACCTACGACTCCGCCTACAATCGAGGTGTGGCGCTCAG CCCTCCTCCCTCAACATTGCGTCCCAAGAACCATCGTCCACTGCGGGAGC CCGACAGGTCATGTAGCAATCCAGATCCGGCCTCAGATGTGATCCAGCCA CTGCAGTCGCCCCCTGCACTTCGTTCAGCCATCGAGTATGTACGGCCAGG CTTGCAGATCAGCCCTGCATCGGGGCCAGGCATACTCCCCGAGTCTGCTA TTGTCGATGCATCTGTTCGACGAGGCTCAGTAGACGGGACAGGTCAGTAC TGGGGTCCAAGCTCAGCACATTCATTTCTGGGCAGGGTAGTGGAGGACTT GCATGCCACTCCCTCCAAATCCATTGCTCCTGCACCAGAGCCCGATGCCT CAGCAACGGTCTCCATCTTTTCCCACGGTGATCGTGTGGTCCCGGAGGTT CGGCTATCAGATTTTGTCTGGCCAGACCAAACCAAGGCCAAAAGTCTGAT CCGCCGATATTTCGAGTTTGCAGCACCGACCTACCGCGTGCTCCATCAGC CTACGCTCCATGCCATGGTACAACGCCTGTACCAGGAGGGCTCGGAGGGC TATCGGATCGGTAGCCAGCTCGATGTAGCATCCCAGGCCGTCGTGCTCTT GCTTCTGAGTACTGCAGCCATGTTCCGAGTCGACGAAGACGGGCGCATGA GAGACGCCGACGACGATGGCTGGCGCAAGAGCGAGCTTTACTACGCACAA GCGGAGCATCTGCTGTCGCTCGAGACGGGTGCCCCTACTCTGGCATCGGT GCAAGCTCGTTTCCTGATGGTGCTGTATCTGCTGAGCTCCTCTCGAGCCC AGAAGGCGTGGTTCGTGTTTGGCACAACAGTCCAGCTGATGATGGCCCTT GGTTTGCACAATCGACGGGCGAGGAGGCTCCATGAAGAAGAAGAGGATCT GGTGCAGCAGGAGTGTCAACGGCGCCTTGTCTGGTGCTCTTACACCCTGG ACAAGTATCTCAGCGTGATCCTTGGTCGACCACGATTGTGGCATGACGAA GACTTGGATGAAGATCTTCCCACACGCGTCAATGACGAGGACCTGACGAT GCGGGAAAGGCGATTGACCAGACGTGATTGTGTGATGGACGCGCCGGTCT TTCATGCGGTATTGGCACAAATTCTCACCCAGGCAGCCAAAAAACCCTAC GTTCTCGCGGGTCTCTCCGATCAGATGGAGATTGAGACCATCCGAGGCCT GTGTGGTGAGGTCGCGAAATGGCAAGCGGAACTGCCTCCTTTTCTTTCGG GGGTCATCCAGCCCAGTAGTTTGGTTCCGGTGTTTCGGCGCCAGCTGACT GTTTTGCAGCTGGCTCGTTATCATGCCTTGATGTTCATCACGCGACCTCT CTTATTGCGGGATTATGGGCAAATGTGGCCTGAGCACCGAAGCAGTTACC GATACCACCTGCATCTGTGTCTCACCGCAGCGCGAGAAGCAATCGAATCG ATCCTTGGATTTGTGCGCGAGGATGAATTGTTTCCAGCATTTTGGTACTC ACAGTACATCGCATTCAATGCTTTGTCCATCATCTATCTATACCTGATCC AGGTCAGACGCAACCGTCTGCCATCTGCGAGTCTCGACTTCGTCGCGAGC CCGGAATACGCCTTGCACACGGATTTGGACGAATCCATGTTGTATAGACT GTCTGAGACGGCAGTGACACACCTCGCCGACGCAACAGCTCGCAACGCTC CTTCTTGGAAATACAGTGTCATTTTGCAGGGTCTGCGACACGAGCTGGCC CGCCTTGGGCCCCCAATATTGGAAAATGACGACGCTCACGCTACAGAACC GATTGCGTTATCCCGTCCAGTTCCCGAATCGATTCCTCGTCCGACCGAAC ATGGAGGTGAGACGGGTCGCCATGAACAGCAGGCAGGGCCCGCCGCAGTC GGAGATTATAACCTTGATCCGAACGGGCTGCCGCCCATATTCGCGGGGCT GGACCCCGCTGTTGATCCAGGGTTGCTCGATCCGAGGACCCAGTCCCTCT TGGACACTTTCGTTATGGGCGAAAACGTGGTGCTTGACTTCTGGCCACAA TTGGAAAGTCTACCTATCAGAGCCGAAGTGCGACTGGGCTCCGACACCGT CAACTACGGGACTTGTGTACACCTATCATAAATGACGGCCAGCGAGGAAG CCTCCTCCCCCGCCACGCGCGCGCGAAAGATCCGAAAGGTGACCCGCGCC TGCGATGCTTGCAAGGCCAAAAAGAAGGCTTGTACGGGCAACATCCCCTG TGGTCCCTGCTCCCGCCGTCACTTGGCATGCACCTACGACTCCGCCTACA ATCGAGGTGTGGCGCTCAGCCCTCCTCCCTCAACATTGCGTCCCAAGAAC CATCGTCCACTGCGGGAGCCCGACAGGTCATGTAGCAATCCAGATCCGGC CTCAGATGTGATCCAGCCACTGCAGTCGCCCCCTGCACTTCGTTCAGCCA TCGAGTATGTACGGCCAGGCTTGCAGATCAGCCCTGCATCGGGGCCAGGC ATACTCCCCGAGTCTGCTATTGTCGATGCATCTGTTCGACGAGGCTCAGT AGACGGGACAGGTCAGTACTGGGGTCCAAGCTCAGCACATTCATTTCTGG GCAGGGTAGTGGAGGACTTGCATGCCACTCCCTCCAAATCCATTGCTCCT GCACCAGAGCCCGATGCCTCAGCAACGGTCTCCATCTTTTCCCACGGTGA TCGTGTGGTCCCGGAGGTTCGGCTATCAGATTTTGTCTGGCCAGACCAAA CCAAGGCCAAAAGTCTGATCCGCCGATATTTCGAGTTTGCAGCACCGACC TACCGCGTGCTCCATCAGCCTACGCTCCATGCCATGGTACAACGCCTGTA CCAGGAGGGCTCGGAGGGCTATCGGATCGGTAGCCAGCTCGATGTAGCAT CCCAGGCCGTCGTGCTCTTGCTTCTGAGTACTGCAGCCATGTTCCGAGTC GACGAAGACGGGCGCATGAGAGACGCCGACGACGATGGCTGGCGCAAGAG CGAGCTTTACTACGCACAAGCGGAGCATCTGCTGTCGCTCGAGACGGGTG CCCCTACTCTGGCATCGGTGCAAGCTCGTTTCCTGATGGTGCTGTATCTG CTGAGCTCCTCTCGAGCCCAGAAGGCGTGGTTCGTGTTTGGCACAACAGT CCAGCTGATGATGGCCCTTGGTTTGCACAATCGACGGGCGAGGAGGCTCC ATGAAGAAGAAGAGGATCTGGTGCAGCAGGAGTGTCAACGGCGCCTTGTC TGGTGCTCTTACACCCTGGACAAGTATCTCAGCGTGATCCTTGGTCGACC ACGATTGTGGCATGACGAAGACTTGGATGAAGATCTTCCCACACGCGTCA ATGACGAGGACCTGACGATGCGGGAAAGGCGATTGACCAGACGTGATTGT GTGATGGACGCGCCGGTCTTTCATGCGGTATTGGCACAAATTCTCACCCA GGCAGCCAAAAAACCCTACGTTCTCGCGGGTCTCTCCGATCAGATGGAGA TTGAGACCATCCGAGGCCTGTGTGGTGAGGTCGCGAAATGGCAAGCGGAA CTGCCTCCTTTTCTTTCGGGGGTCATCCAGCCCAGTAGTTTGGTTCCGGT GTTTCGGCGCCAGCTGACTGTTTTGCAGCTGGCTCGTTATCATGCCTTGA TGTTCATCACGCGACCTCTCTTATTGCGGGATTATGGGCAAATGTGGCCT GAGCACCGAAGCAGTTACCGATACCACCTGCATCTGTGTCTCACCGCAGC GCGAGAAGCAATCGAATCGATCCTTGGATTTGTGCGCGAGGATGAATTGT TTCCAGCATTTTGGTACTCACAGTACATCGCATTCAATGCTTTGTCCATC ATCTATCTATACCTGATCCAGGTCAGACGCAACCGTCTGCCATCTGCGAG TCTCGACTTCGTCGCGAGCCCGGAATACGCCTTGCACACGGATTTGGACG AATCCATGTTGTATAGACTGTCTGAGACGGCAGTGACACACCTCGCCGAC GCAACAGCTCGCAACGCTCCTTCTTGGAAATACAGTGTCATTTTGCAGGG TCTGCGACACGAGCTGGCCCGCCTTGGGCCCCCAATATTGGAAAATGACG ACGCTCACGCTACAGAACCGATTGCGTTATCCCGTCCAGTTCCCGAATCG ATTCCTCGTCCGACCGAACATGGAGGTGAGACGGGTCGCCATGAACAGCA GGCAGGGCCCGCCGCAGTCGGAGATTATAACCTTGATCCGAACGGGCTGC CGCCCATATTCGCGGGGCTGGACCCCGCTGTTGATCCAGGGTTGCTCGAT CCGAGGACCCAGTCCCTCTTGGACACTTTCGTTATGGGCGAAAACGTGGT GCTTGACTTCTGGCCACAATTGGAAAGTCTACCTATCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006351 | transcription, DNA-templated |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_2.13 |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR007219 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
DBxref | PFAM:PF04082 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:4834869..4837275 - |
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