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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:217777..219958- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003012-T1 ID=KYF_003012-T1|Name=KYF_003012-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2182bp|location=Sequence derived from alignment at ch3:217777..219958- (Aspergillus niger KYF3) ATGACATCAGGGGCCGTCGTCACTACCACTGAGGCCCCTGCTCGCTCTGG
CAAGCCAACTGACACCCCAGTGCGCTCTCGTTCCTTGGGAGGATGCGAGA
CCTGTCGTCGGCGCCATGCTAAGTGTGATGAGACTCGGCCATCCTGTCTC
GTGTGTAAGCGTGCGGGGCTCGTCTGTGAGAGGTACGAGATCCGGCTGTT
GTTCGATGCGAGCGACAGTCAGAGCTCACGATGTCGCCGTCCTCTGTTCA
CCGAAGATATGCGTCAGCGCATGAGTGAGCAGTTGACCGACAGCTTGGAC
TTGGATGATGTCCACACCATCCTGACCAAGATTGATGATCAATGCGAGAG
CCAGGAGGGAGATACTAATTCCAGTTTTACTACCTGCATGGGTCCCTTTG
GTGCCTTTCGGGTGGTTCGAGCTGAGATGGACCTCCCCGAATCCCCAATG
GACCCAGTCGACGAACCCCTTCCTCATGTGGAAGAAAACCCAGCAACTGC
TGGGCTGGAAATGTCTTTGGATGATGCATTTAGCAATGATCCCCTCATGG
AGTGTCTGTTTGGCCATGTGAACGTAGATGTTACTGCCGACTTGGATGCT
CATGACTTCTTCGCCGCAACCCTACCTTCAGCCGAAAGTGAGGGAATTTC
CCCACAATCCTTGTCAGGGGGCTTCCTTATGGGACCATCGCCATCAGTTC
CTCTGCAAGCATCGTTATTATCGTCGCCGGAGATCCAATATGCTCCTTCC
GTGACCAACCTGGCCCCGCCAGATGCCCCCTTATTGCTATCTGCATACAC
GAAGAATGTCACTCAGCTGTTCAGCCCAATACAGCTGGAAAAGAGCCCCT
GGAGTATGCTCTATATGCCTCCCGCCATGGAGACCTTAGCTTTGTTGACT
ATGGGAGAGTTGGCCAACAACACCAGGATGTCTATCTTCTATGCAATCCT
GGCCACTTCGGCCTTCACCCAGCGTCTATCCTCGTTGACGCGCAGCGCAA
GTCAATATTGGCAGAGACAGGCAGAGACCTTTGCCATCGAAGCCCAGAAT
CATCTCAAACGAGCGCTACATGATGCATCATCGAGCGTCAAAAAAGTCAA
GTACAAAGACGTCCTTATCGCCTTGCTGTGCATGAACACGGTTTCGGTAA
GCACAACAGCCGCAGCTGAGCAGAGCACAAGTCTCACCATGAACTTAGGC
CTACCAAGGGAGCACAGAGCGGGTGCGACGATGTCTGTTAGACTGCGAAA
ATTGGGTCCGTTTTCGTGGCTTGCCTAAAACGCGGAAATCACGCAAGGTC
CGCTTACTACACCATTGCTATGTCTATTTACGTATCTTCCAGGAGAGCAC
CTCCGTCCTCCCTGTGTCCCACGTAGAGATAGAGTCCGACCATGCATCCC
CCGATACTGTGCGCTCCATCGCCACGACTCGCTCGTTCCGGCTTCGGCAA
TGGGAAGGTCGTTTGGACCAGCGTATGAGTGAATTGAAGGAGCAGCACCA
GGGGGAGAATGATTTGCACTTGGAAATTCCGGGCCGCTGGGACTCGACCA
TGTACCCGCAGGTCTTTGGTCTGCCGGAATCTCTACTATTCCTACTATCA
CAGGTCACGAGACTGGGCAATGAGCGAGACCTATCGGACTTGGGGAGCTA
TACGGGCGCGCTGGATTTTAGGCAGTTCTCCGCGCGGGCGCGGAGTCTGG
AGCGATGCATTTCTACTTGGCGACCACCTTCTTTACCAGATGCAGATCCA
CATAGCATCATCGCTCAGACAAACGCTACCATTGTCCGCCTGATGCTCTC
AGCCCTTCACAAAGCTCTTCTTATCTTCTTTTACCGTCGGATCTATGACG
TGGACCCGATGATCCTTCAAGACAAAGCGTGGCAAGTCCGGGACGCCTTG
GCTCAGGTAGAAAGAGACGATATGCCGGCGACTCGTATAGCTGCACCATT
TATTTGGGCGGCGTTTATTGCCGCCTGTGAGGTTTTGGATCCTACTTTGC
AAGACTGGTTTGCAGGCTGGTTCGAGACGTCAGCCAGAAAGAGCGGGCTT
GGGACCTTTAAGCTGGCGCTGAAAATAGCAAGGCAGGTCTGGGAGAGACA
ACGGCTGCCCCTGAATAGCAGCGCCAGCACCAGTTGGCCGCAGATTATGC
GGGAAAGCAACCTGAGTTTGTTCTACATATAA back to topCoding sequence (CDS) from alignment at ch3:217777..219958- >KYF_003012-T1 ID=KYF_003012-T1|Name=KYF_003012-T1|organism=Aspergillus niger KYF3|type=CDS|length=4260bp|location=Sequence derived from alignment at ch3:217777..219958- (Aspergillus niger KYF3) GCCTACCAAGGGAGCACAGAGCGGGTGCGACGATGTCTGTTAGACTGCGA AAATTGGGTCCGTTTTCGTGGCTTGCCTAAAACGCGGAAATCACGCAAGG TCCGCTTACTACACCATTGCTATGTCTATTTACGTATCTTCCAGGAGAGC ACCTCCGTCCTCCCTGTGTCCCACGTAGAGATAGAGTCCGACCATGCATC CCCCGATACTGTGCGCTCCATCGCCACGACTCGCTCGTTCCGGCTTCGGC AATGGGAAGGTCGTTTGGACCAGCGTATGAGTGAATTGAAGGAGCAGCAC CAGGGGGAGAATGATTTGCACTTGGAAATTCCGGGCCGCTGGGACTCGAC CATGTACCCGCAGGTCTTTGGTCTGCCGGAATCTCTACTATTCCTACTAT CACAGGTCACGAGACTGGGCAATGAGCGAGACCTATCGGACTTGGGGAGC TATACGGGCGCGCTGGATTTTAGGCAGTTCTCCGCGCGGGCGCGGAGTCT GGAGCGATGCATTTCTACTTGGCGACCACCTTCTTTACCAGATGCAGATC CACATAGCATCATCGCTCAGACAAACGCTACCATTGTCCGCCTGATGCTC TCAGCCCTTCACAAAGCTCTTCTTATCTTCTTTTACCGTCGGATCTATGA CGTGGACCCGATGATCCTTCAAGACAAAGCGTGGCAAGTCCGGGACGCCT TGGCTCAGGTAGAAAGAGACGATATGCCGGCGACTCGTATAGCTGCACCA TTTATTTGGGCGGCGTTTATTGCCGCCTGTGAGGTTTTGGATCCTACTTT GCAAGACTGGTTTGCAGGCTGGTTCGAGACGTCAGCCAGAAAGAGCGGGC TTGGGACCTTTAAGCTGGCGCTGAAAATAGCAAGGCAGGTCTGGGAGAGA CAACGGCTGCCCCTGAATAGCAGCGCCAGCACCAGTTGGCCGCAGATTAT GCGGGAAAGCAACCTGAGTTTGTTCTACATATAAATGACATCAGGGGCCG TCGTCACTACCACTGAGGCCCCTGCTCGCTCTGGCAAGCCAACTGACACC CCAGTGCGCTCTCGTTCCTTGGGAGGATGCGAGACCTGTCGTCGGCGCCA TGCTAAGTGTGATGAGACTCGGCCATCCTGTCTCGTGTGTAAGCGTGCGG GGCTCGTCTGTGAGAGGTACGAGATCCGGCTGTTGTTCGATGCGAGCGAC AGTCAGAGCTCACGATGTCGCCGTCCTCTGTTCACCGAAGATATGCGTCA GCGCATGAGTGAGCAGTTGACCGACAGCTTGGACTTGGATGATGTCCACA CCATCCTGACCAAGATTGATGATCAATGCGAGAGCCAGGAGGGAGATACT AATTCCAGTTTTACTACCTGCATGGGTCCCTTTGGTGCCTTTCGGGTGGT TCGAGCTGAGATGGACCTCCCCGAATCCCCAATGGACCCAGTCGACGAAC CCCTTCCTCATGTGGAAGAAAACCCAGCAACTGCTGGGCTGGAAATGTCT TTGGATGATGCATTTAGCAATGATCCCCTCATGGAGTGTCTGTTTGGCCA TGTGAACGTAGATGTTACTGCCGACTTGGATGCTCATGACTTCTTCGCCG CAACCCTACCTTCAGCCGAAAGTGAGGGAATTTCCCCACAATCCTTGTCA GGGGGCTTCCTTATGGGACCATCGCCATCAGTTCCTCTGCAAGCATCGTT ATTATCGTCGCCGGAGATCCAATATGCTCCTTCCGTGACCAACCTGGCCC CGCCAGATGCCCCCTTATTGCTATCTGCATACACGAAGAATGTCACTCAG CTGTTCAGCCCAATACAGCTGGAAAAGAGCCCCTGGAGTATGCTCTATAT GCCTCCCGCCATGGAGACCTTAGCTTTGTTGACTATGGGAGAGTTGGCCA ACAACACCAGGATGTCTATCTTCTATGCAATCCTGGCCACTTCGGCCTTC ACCCAGCGTCTATCCTCGTTGACGCGCAGCGCAAGTCAATATTGGCAGAG ACAGGCAGAGACCTTTGCCATCGAAGCCCAGAATCATCTCAAACGAGCGC TACATGATGCATCATCGAGCGTCAAAAAAGTCAAGTACAAAGACGTCCTT ATCGCCTTGCTGTGCATGAACACGGTTTCGGCCTACCAAGGGAGCACAGA GCGGGTGCGACGATGTCTGTTAGACTGCGAAAATTGGGTCCGTTTTCGTG GCTTGCCTAAAACGCGGAAATCACGCAAGGTCCGCTTACTACACCATTGC TATGTCTATTTACGTATCTTCCAGGAGAGCACCTCCGTCCTCCCTGTGTC CCACGTAGAGATAGAGTCCGACCATGCATCCCCCGATACTGTGCGCTCCA TCGCCACGACTCGCTCGTTCCGGCTTCGGCAATGGGAAGGTCGTTTGGAC CAGCGTATGAGTGAATTGAAGGAGCAGCACCAGGGGGAGAATGATTTGCA CTTGGAAATTCCGGGCCGCTGGGACTCGACCATGTACCCGCAGGTCTTTG GTCTGCCGGAATCTCTACTATTCCTACTATCACAGGTCACGAGACTGGGC AATGAGCGAGACCTATCGGACTTGGGGAGCTATACGGGCGCGCTGGATTT TAGGCAGTTCTCCGCGCGGGCGCGGAGTCTGGAGCGATGCATTTCTACTT GGCGACCACCTTCTTTACCAGATGCAGATCCACATAGCATCATCGCTCAG ACAAACGCTACCATTGTCCGCCTGATGCTCTCAGCCCTTCACAAAGCTCT TCTTATCTTCTTTTACCGTCGGATCTATGACGTGGACCCGATGATCCTTC AAGACAAAGCGTGGCAAGTCCGGGACGCCTTGGCTCAGGTAGAAAGAGAC GATATGCCGGCGACTCGTATAGCTGCACCATTTATTTGGGCGGCGTTTAT TGCCGCCTGTGAGGTTTTGGATCCTACTTTGCAAGACTGGTTTGCAGGCT GGTTCGAGACGTCAGCCAGAAAGAGCGGGCTTGGGACCTTTAAGCTGGCG CTGAAAATAGCAAGGCAGGTCTGGGAGAGACAACGGCTGCCCCTGAATAG CAGCGCCAGCACCAGTTGGCCGCAGATTATGCGGGAAAGCAACCTGAGTT TGTTCTACATATAAATGACATCAGGGGCCGTCGTCACTACCACTGAGGCC CCTGCTCGCTCTGGCAAGCCAACTGACACCCCAGTGCGCTCTCGTTCCTT GGGAGGATGCGAGACCTGTCGTCGGCGCCATGCTAAGTGTGATGAGACTC GGCCATCCTGTCTCGTGTGTAAGCGTGCGGGGCTCGTCTGTGAGAGGTAC GAGATCCGGCTGTTGTTCGATGCGAGCGACAGTCAGAGCTCACGATGTCG CCGTCCTCTGTTCACCGAAGATATGCGTCAGCGCATGAGTGAGCAGTTGA CCGACAGCTTGGACTTGGATGATGTCCACACCATCCTGACCAAGATTGAT GATCAATGCGAGAGCCAGGAGGGAGATACTAATTCCAGTTTTACTACCTG CATGGGTCCCTTTGGTGCCTTTCGGGTGGTTCGAGCTGAGATGGACCTCC CCGAATCCCCAATGGACCCAGTCGACGAACCCCTTCCTCATGTGGAAGAA AACCCAGCAACTGCTGGGCTGGAAATGTCTTTGGATGATGCATTTAGCAA TGATCCCCTCATGGAGTGTCTGTTTGGCCATGTGAACGTAGATGTTACTG CCGACTTGGATGCTCATGACTTCTTCGCCGCAACCCTACCTTCAGCCGAA AGTGAGGGAATTTCCCCACAATCCTTGTCAGGGGGCTTCCTTATGGGACC ATCGCCATCAGTTCCTCTGCAAGCATCGTTATTATCGTCGCCGGAGATCC AATATGCTCCTTCCGTGACCAACCTGGCCCCGCCAGATGCCCCCTTATTG CTATCTGCATACACGAAGAATGTCACTCAGCTGTTCAGCCCAATACAGCT GGAAAAGAGCCCCTGGAGTATGCTCTATATGCCTCCCGCCATGGAGACCT TAGCTTTGTTGACTATGGGAGAGTTGGCCAACAACACCAGGATGTCTATC TTCTATGCAATCCTGGCCACTTCGGCCTTCACCCAGCGTCTATCCTCGTT GACGCGCAGCGCAAGTCAATATTGGCAGAGACAGGCAGAGACCTTTGCCA TCGAAGCCCAGAATCATCTCAAACGAGCGCTACATGATGCATCATCGAGC GTCAAAAAAGTCAAGTACAAAGACGTCCTTATCGCCTTGCTGTGCATGAA CACGGTTTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_3.3 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR021858 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
DBxref | PFAM:PF11951 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:217777..219958 - |
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