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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:227797..228759+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003017-T1 ID=KYF_003017-T1|Name=KYF_003017-T1|organism=Aspergillus niger KYF3|type=mRNA|length=963bp|location=Sequence derived from alignment at ch3:227797..228759+ (Aspergillus niger KYF3)
ATGCCCATTTTCGACGCAACAGCCACCAGCGAACAGGTCATCGAAGCCTT
CAAGTCTAACATCAAAGGCAAGACCTTCGTCATCACCGGCGCCGGCAAGC
CCAGTATCGGCAGCCAGATGGCTACATCTCTAGCCAAAGCCGAGCCATCA
CATATCCTCATTGCCTCACGCACCCTCGGCAAAGTTCATCCAGTGTTGGA
TGAGATCCACGCCATCGACAGCACCATCAAAACTACAGCGGTAGAGGTGG
ACCTGACAGATCATGAATCCGTTCGCCGCGCCGCAGACGAGATTCTCGCT
GCGGCACCCAAGATCGATGTCCTGATCAACAGTGCCGGGGTCATGGCAAT
CAAGAAATACACCCTCGACAAGCAGGGGATAGAGCTACAACTCTCTGCTA
ATCACGTTGGCCACTTCTTACTCACCAACATGCTCATACCGGCTCTCATA
TCTGCTGGATCCGCGCGCGTGGTCAATCTAACCAGCGCCGGGTACCTCGT
CTCGCCATTTCGGTTCGAAGACTGGAACTATTCCAACGGAAAAGAATACG
ACCCGTGGACTGGGTACGGGCAGGCTAAAACAGCCAATATATTATTCACC
TATGGCTTAGGCCAGCGGCTAAAGCATAAGGGAATTGCAGCCGTTGCTGT
TCATCCAGGCTATAATGGAGATACTAAACTTGGCAGTCACCTTACTTGGG
ACGATTACGCTAAGATCTCTGCGGTTGCGATACGGAATACCGGCAAGGAG
TTTGTTTTCGAGGAGCCTCGGTTCAAAACGTATACCCAGATTGCGGCTAC
TCCGTTGATTGCCGCTTTGGATCCGGAGTTGCAGGCTCTGGCGCCGGTGT
ACATGCAGAATAGTGTGGTTAGTGAGGCTGCGGAGCATGCTCGGGATCCT
GCGAGTGTGGATGCTTTGTGGAGGTTGAGTGAGGGGCTTGTTGGGCAGGA
GTTTCGGTATTAG back to topCoding sequence (CDS) from alignment at ch3:227797..228759+ >KYF_003017-T1 ID=KYF_003017-T1|Name=KYF_003017-T1|organism=Aspergillus niger KYF3|type=CDS|length=963bp|location=Sequence derived from alignment at ch3:227797..228759+ (Aspergillus niger KYF3)
ATGCCCATTTTCGACGCAACAGCCACCAGCGAACAGGTCATCGAAGCCTT
CAAGTCTAACATCAAAGGCAAGACCTTCGTCATCACCGGCGCCGGCAAGC
CCAGTATCGGCAGCCAGATGGCTACATCTCTAGCCAAAGCCGAGCCATCA
CATATCCTCATTGCCTCACGCACCCTCGGCAAAGTTCATCCAGTGTTGGA
TGAGATCCACGCCATCGACAGCACCATCAAAACTACAGCGGTAGAGGTGG
ACCTGACAGATCATGAATCCGTTCGCCGCGCCGCAGACGAGATTCTCGCT
GCGGCACCCAAGATCGATGTCCTGATCAACAGTGCCGGGGTCATGGCAAT
CAAGAAATACACCCTCGACAAGCAGGGGATAGAGCTACAACTCTCTGCTA
ATCACGTTGGCCACTTCTTACTCACCAACATGCTCATACCGGCTCTCATA
TCTGCTGGATCCGCGCGCGTGGTCAATCTAACCAGCGCCGGGTACCTCGT
CTCGCCATTTCGGTTCGAAGACTGGAACTATTCCAACGGAAAAGAATACG
ACCCGTGGACTGGGTACGGGCAGGCTAAAACAGCCAATATATTATTCACC
TATGGCTTAGGCCAGCGGCTAAAGCATAAGGGAATTGCAGCCGTTGCTGT
TCATCCAGGCTATAATGGAGATACTAAACTTGGCAGTCACCTTACTTGGG
ACGATTACGCTAAGATCTCTGCGGTTGCGATACGGAATACCGGCAAGGAG
TTTGTTTTCGAGGAGCCTCGGTTCAAAACGTATACCCAGATTGCGGCTAC
TCCGTTGATTGCCGCTTTGGATCCGGAGTTGCAGGCTCTGGCGCCGGTGT
ACATGCAGAATAGTGTGGTTAGTGAGGCTGCGGAGCATGCTCGGGATCCT
GCGAGTGTGGATGCTTTGTGGAGGTTGAGTGAGGGGCTTGTTGGGCAGGA
GTTTCGGTATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.3 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:227797..228759 + |
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